RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 EXTL3O43909 919 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 KLK7P49862 253 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 VAMP7P51809 220 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 LAMTOR4Q0VGL1 99 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 EXOC3L4Q17RC7 722 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 CBWD1Q9BRT8 395 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 RNPEPQ9H4A4 650 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 PPP2R2CQ9Y2T4 447 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 SSU72P8A0A1W2PR75 194 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
PDPN-202ENST00000376057 CYP2J2P51589 502 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 SOX10P56693 466 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 H3BRB1 525 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 HAS3O00219 553 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 F2P00734 622 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 CCDC175P0C221 793 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 CPT1AP50416 773 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
PDPN-202ENST00000376057 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
PDPN-202ENST00000376057 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
PDPN-202ENST00000376057 IKZF4Q9H2S9 585 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 FZD8Q9H461 694 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
PDPN-202ENST00000376057 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
PDPN-202ENST00000376057 A0A0B4J269 797 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 EIF3CLB5ME19 914 aaKnown RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 MSCO60682 206 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 GNRH1P01148 92 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 INSRRP14616 1297 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 JAM2P57087 298 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDPN-202ENST00000376057 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 TRIM50Q86XT4 487 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 ZBTB8OSQ8IWT0 167 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 EIF3CQ99613 913 aaKnown RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 SUCLA2Q9P2R7 463 aaPredicted RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 BZW2Q9Y6E2 419 aaKnown RBP12.11□□□□□ -0.47
PDPN-202ENST00000376057 EPHB6O15197 1021 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 ADCY6O43306 1168 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 PROZP22891 400 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 CTGFP29279 349 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 MAP2K2P36507 400 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 PTENP60484 403 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 CETN1Q12798 172 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
PDPN-202ENST00000376057 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 HOXC8P31273 242 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 LIG4P49917 911 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 PSMD6Q15008 389 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 EPC2Q52LR7 807 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 EHBP1Q8NDI1 1231 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 PARD3BQ8TEW8 1205 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 FAM81BQ96LP2 452 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 MRPL4Q9BYD3 311 aaKnown RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 EPN1Q9Y6I3 576 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 NRCAMQ92823 1304 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 ACKR2O00590 384 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 NDUFA10O95299 355 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 AKR1A1P14550 325 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 UCHL3P15374 230 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 TMOD1P28289 359 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 CYLC1P35663 651 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 PRKCIP41743 596 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 APLP1P51693 650 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 KRT83P78385 493 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
PDPN-202ENST00000376057 TRIM65Q6PJ69 517 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
PDPN-202ENST00000376057 ZNF410Q86VK4 478 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms