RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 FAM193BQ96PV7 902 aaPredicted RBP25.92■■□□□ 1.74
C9orf47-202ENST00000375850 LXNQ9BS40 222 aa25.92■■□□□ 1.74
C9orf47-202ENST00000375850 SFXN1Q9H9B4 322 aa25.92■■□□□ 1.74
C9orf47-202ENST00000375850 DBR1Q9UK59 544 aaKnown RBP25.92■■□□□ 1.74
C9orf47-202ENST00000375850 WDFY4Q6ZS81 3184 aa25.92■■□□□ 1.74
C9orf47-202ENST00000375850 SP100P23497 879 aaPredicted RBP25.91■■□□□ 1.74
C9orf47-202ENST00000375850 AXLP30530 894 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 NCBP1Q09161 790 aaKnown RBP25.91■■□□□ 1.74
C9orf47-202ENST00000375850 LAMTOR4Q0VGL1 99 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 SCRN1Q12765 414 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 TCF15Q12870 199 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 PTPN14Q15678 1187 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 LONRF3Q496Y0 759 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 AGMOQ6ZNB7 445 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 CCDC51Q96ER9 411 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 LARP6Q9BRS8 491 aaKnown RBP25.91■■□□□ 1.74
C9orf47-202ENST00000375850 GBP3Q9H0R5 595 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 SSX2IPQ9Y2D8 614 aa25.91■■□□□ 1.74
C9orf47-202ENST00000375850 ZDBF2Q9HCK1 2354 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 MEIS3P2A8K0S8 358 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 SRGAP2CP0DJJ0 459 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 EPCAMP16422 314 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 NCLP19338 710 aaKnown RBP25.9■■□□□ 1.74
C9orf47-202ENST00000375850 MXD4Q14582 209 aaPredicted RBP25.9■■□□□ 1.74
C9orf47-202ENST00000375850 EMC2Q15006 297 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 PIK3AP1Q6ZUJ8 805 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 FERMT3Q86UX7 667 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 AUTS2Q8WXX7 1259 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 HAS1Q92839 578 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 TMEM143Q96AN5 459 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 BRMS1Q9HCU9 246 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 DNAJB4Q9UDY4 337 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 FAN1Q9Y2M0 1017 aa25.9■■□□□ 1.74
C9orf47-202ENST00000375850 PFKFB2O60825 505 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 ERLIN2O94905 339 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 HOXA11P31270 313 aaPredicted RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 VCPP55072 806 aaKnown RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 POU5F1BQ06416 359 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 ANKRD1Q15327 319 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 ELMSAN1Q6PJG2 1045 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 ZNF280BQ86YH2 543 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 RNF149Q8NC42 400 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 BCL7CQ8WUZ0 217 aaPredicted RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 ACSF2Q96CM8 615 aaPredicted RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 MRPL17Q9NRX2 175 aaKnown RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 WRAP73Q9P2S5 460 aaPredicted RBP25.89■■□□□ 1.74
C9orf47-202ENST00000375850 DPP7Q9UHL4 492 aa25.89■■□□□ 1.74
C9orf47-202ENST00000375850 TFDP1Q14186 410 aa25.88■■□□□ 1.73
C9orf47-202ENST00000375850 XKR9Q5GH70 373 aa25.88■■□□□ 1.73
C9orf47-202ENST00000375850 NCAPH2Q6IBW4 605 aa25.88■■□□□ 1.73
C9orf47-202ENST00000375850 ZNF579Q8NAF0 562 aaKnown RBP25.88■■□□□ 1.73
C9orf47-202ENST00000375850 MTRQ99707 1265 aa25.88■■□□□ 1.73
C9orf47-202ENST00000375850 CDH22Q9UJ99 828 aa25.88■■□□□ 1.73
C9orf47-202ENST00000375850 SPDYE4A6NLX3 237 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 INPPL1O15357 1258 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 BRD1O95696 1058 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 KLRC2P26717 231 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 SPIRE1Q08AE8 756 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 UBXN11Q5T124 520 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 C15orf39Q6ZRI6 1047 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 OTOP3Q7RTS5 596 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 GPR149Q86SP6 731 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 C12orf76Q8N812 135 aaPredicted RBP25.87■■□□□ 1.73
C9orf47-202ENST00000375850 KLHL5Q96PQ7 755 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 MINDY3Q9H8M7 445 aa25.87■■□□□ 1.73
C9orf47-202ENST00000375850 DDHD2O94830 711 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 LYPLA2O95372 231 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 ITGA4P13612 1032 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 CLCN4P51793 760 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 ANAPC15P60006 121 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 PTENP60484 403 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 NOTUMQ6P988 496 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 CYP26C1Q6V0L0 522 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 CCDC149Q6ZUS6 474 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 POTEDQ86YR6 584 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 IFNLR1Q8IU57 520 aaPredicted RBP25.86■■□□□ 1.73
C9orf47-202ENST00000375850 HACE1Q8IYU2 909 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 DYDC2Q96IM9 177 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 VN1R3Q9BXE9 311 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 RGL1Q9NZL6 768 aa25.86■■□□□ 1.73
C9orf47-202ENST00000375850 ORC3Q9UBD5 711 aaPredicted RBP25.86■■□□□ 1.73
C9orf47-202ENST00000375850 NRP1O14786 923 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 ST18O60284 1047 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 LILRB3O75022 631 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 NR1I2O75469 434 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 SOD2P04179 222 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 URODP06132 367 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 KRT2P35908 639 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 TMC5Q6UXY8 1006 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 CMASQ8NFW8 434 aaPredicted RBP25.85■■□□□ 1.73
C9orf47-202ENST00000375850 RHOBTB2Q9BYZ6 727 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 KMT2EQ8IZD2 1858 aa25.85■■□□□ 1.73
C9orf47-202ENST00000375850 GALR2O43603 387 aaPredicted RBP25.84■■□□□ 1.73
C9orf47-202ENST00000375850 B4GALT3O60512 393 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 DGAT1O75907 488 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 C1RP00736 705 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 CNPP09543 421 aaKnown RBP25.84■■□□□ 1.73
C9orf47-202ENST00000375850 WEE2P0C1S8 567 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 TPH2Q8IWU9 490 aa25.84■■□□□ 1.73
C9orf47-202ENST00000375850 OXER1Q8TDS5 423 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms