RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TIPINQ9BVW5 301 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 ST6GALNAC4Q9H4F1 302 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 DMGDHQ9UI17 866 aaKnown RBP15.14■□□□□ 0.01
MSH5-202ENST00000375740 PCDHA10Q9Y5I2 948 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 EMSYQ7Z589 1322 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 OAZ1P54368 228 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 ARHGAP44Q17R89 818 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 CATSPERGQ6ZRH7 1159 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 INTS8Q75QN2 995 aaKnown RBP15.14■□□□□ 0.01
MSH5-202ENST00000375740 C12orf56Q8IXR9 622 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 SH2D3CQ8N5H7 860 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 XXYLT1Q8NBI6 393 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 SLC30A5Q8TAD4 765 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 GPRASP2Q96D09 838 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 KLRG1Q96E93 195 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
MSH5-202ENST00000375740 HSPBP1Q9NZL4 362 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 RNF14Q9UBS8 474 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 PHIPQ8WWQ0 1821 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 H0YHG0 523 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 RGS20O76081 388 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 ATP1A2P50993 1020 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 SLC7A5Q01650 507 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 PPP3CAQ08209 521 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
MSH5-202ENST00000375740 TTMPQ5BVD1 217 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 ZNF746Q6NUN9 644 aaPredicted RBP15.13■□□□□ 0.01
MSH5-202ENST00000375740 OLIG1Q8TAK6 271 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 NSUN6Q8TEA1 469 aaKnown RBP15.13■□□□□ 0.01
MSH5-202ENST00000375740 TMEM174Q8WUU8 243 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 CABS1Q96KC9 395 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 GABBR1Q9UBS5 961 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 TELO2Q9Y4R8 837 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 NDUFAB1O14561 156 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 KCTD16Q68DU8 428 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 TSEN2Q8NCE0 465 aaKnown RBP15.13■□□□□ 0.01
MSH5-202ENST00000375740 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
MSH5-202ENST00000375740 SENP7Q9BQF6 1050 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 GOLPH3Q9H4A6 298 aa15.13■□□□□ 0.01
MSH5-202ENST00000375740 CCDC169A6NNP5 214 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 MAFGO15525 162 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 LRRN2O75325 713 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 PPARDQ03181 441 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 PRKG1Q13976 671 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 C1orf220Q5T0J3 134 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 RDM1Q8NG50 284 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 PLEKHO2Q8TD55 490 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 SGIP1Q9BQI5 828 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 KIAA1217Q5T5P2 1943 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 GOLGA8IPA6NC78 632 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 GOLGA8JA6NMD2 632 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 KCNA2P16389 499 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 USP8P40818 1118 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 GCLMP48507 274 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 HIRAP54198 1017 aaPredicted RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 GALCP54803 685 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
MSH5-202ENST00000375740 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 LRRC57Q8N9N7 239 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
MSH5-202ENST00000375740 CCDC189A1A4V9 331 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 TMCO5BA8MYB1 307 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 ZNF862O60290 1169 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 ZEB2O60315 1214 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 LMNB1P20700 586 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 NPTX2P47972 431 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 SOX10P56693 466 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 SWSAP1Q6NVH7 229 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 TPCN2Q8NHX9 752 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 SYT11Q9BT88 431 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 KIFC3Q9BVG8 833 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 TEX13BQ9BXU2 312 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 UBE2TQ9NPD8 197 aaPredicted RBP15.11■□□□□ 0.01
MSH5-202ENST00000375740 A1CFQ9NQ94 594 aaKnown RBP15.11■□□□□ 0.01
MSH5-202ENST00000375740 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
MSH5-202ENST00000375740 SORBS3O60504 671 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 STBD1O95210 358 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 SNRPFP62306 86 aaKnown RBP15.11■□□□□ 0.01
MSH5-202ENST00000375740 SP4Q02446 784 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 PTPROQ16827 1216 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 OTUD6AQ7L8S5 288 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 ARHGEF19Q8IW93 802 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 TMEM161BQ8NDZ6 487 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms