RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 TTLL3Q9Y4R7 772 aa17.96■□□□□ 0.47
VARS-215ENST00000375663 GOLGA8MH3BSY2 632 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 K7ERI5 159 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 P4HBP07237 508 aaKnown RBP17.95■□□□□ 0.46
VARS-215ENST00000375663 ZC2HC1CQ53FD0 456 aaPredicted RBP17.95■□□□□ 0.46
VARS-215ENST00000375663 ZNF394Q53GI3 561 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 AENQ8WTP8 325 aaKnown RBP17.95■□□□□ 0.46
VARS-215ENST00000375663 CNKSR1Q969H4 720 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 TTC25Q96NG3 672 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 EHD4Q9H223 541 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 RPA1P27694 616 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 TMEM270Q6UE05 265 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 HAUS6Q7Z4H7 955 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 KCTD6Q8NC69 237 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 GRAMD1AQ96CP6 724 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
VARS-215ENST00000375663 ZFP69BQ9UJL9 534 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 CLDN3O15551 220 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 SPAG7O75391 227 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 CPP00450 1065 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 ABL1P00519 1130 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 POLE2P56282 527 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 ARL4CP56559 192 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 ITPK1Q13572 414 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 TMBIM4Q9HC24 238 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 CD248Q9HCU0 757 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 STOML1Q9UBI4 398 aa17.95■□□□□ 0.46
VARS-215ENST00000375663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
VARS-215ENST00000375663 IQANK1A0A1B0GTG1 560 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 EIF4E1BA6NMX2 242 aaKnown RBP17.94■□□□□ 0.46
VARS-215ENST00000375663 MAP3K7O43318 606 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 QARSP47897 775 aaKnown RBP17.94■□□□□ 0.46
VARS-215ENST00000375663 TRMT10CQ7L0Y3 403 aaKnown RBP17.94■□□□□ 0.46
VARS-215ENST00000375663 TRIM50Q86XT4 487 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 FAM213AQ9BRX8 229 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 TBX3O15119 743 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 MKRN3Q13064 507 aaKnown RBP17.94■□□□□ 0.46
VARS-215ENST00000375663 MTMR1Q13613 665 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 CEP55Q53EZ4 464 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 PACS2Q86VP3 889 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 ERICH1Q86X53 443 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 C9orf72Q96LT7 481 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 ZWILCHQ9H900 591 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 CDH16O75309 829 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 SCP2P22307 547 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 GPS1Q13098 491 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 RHOT1Q8IXI2 618 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 SPDL1Q96EA4 605 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 TUFT1Q9NNX1 390 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 FGFR1OP2Q9NVK5 253 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 PDHA1P08559 390 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 COMTP21964 271 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 NFIXQ14938 502 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 EPHA7Q15375 998 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 NXNQ6DKJ4 435 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 CYB5D1Q6P9G0 228 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 AFAP1L2Q8N4X5 818 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 FBXL13Q8NEE6 735 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 ATL2Q8NHH9 583 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 YIPF3Q9GZM5 350 aa17.94■□□□□ 0.46
VARS-215ENST00000375663 TPD52P55327 224 aaPredicted RBP17.93■□□□□ 0.46
VARS-215ENST00000375663 MEI1Q5TIA1 1274 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 SLC30A5Q8TAD4 765 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 PABPC3Q9H361 631 aaKnown RBP17.93■□□□□ 0.46
VARS-215ENST00000375663 INO80B-WBP1J3KQ70 363 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 TLR3O15455 904 aaKnown RBP17.93■□□□□ 0.46
VARS-215ENST00000375663 DIAPH2O60879 1101 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 PPP4CP60510 307 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 INO80BQ9C086 356 aaPredicted RBP17.93■□□□□ 0.46
VARS-215ENST00000375663 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS-215ENST00000375663 TMEM120BA0PK00 339 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 PON1P27169 355 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 STAT4Q14765 748 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 NUF2Q9BZD4 464 aa17.93■□□□□ 0.46
VARS-215ENST00000375663 PPARGC1AQ9UBK2 798 aaKnown RBP17.93■□□□□ 0.46
VARS-215ENST00000375663 JCADQ9P266 1359 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 HAUS5O94927 633 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 SYF2O95926 243 aaKnown RBP17.92■□□□□ 0.46
VARS-215ENST00000375663 FAM153BP0C7A2 387 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 RAD23BP54727 409 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 FAM153CQ494X1 144 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 SCARA5Q6ZMJ2 495 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
VARS-215ENST00000375663 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 SH2D3AQ9BRG2 576 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 FAM153AQ9UHL3 310 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 TOM1L1O75674 476 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 LMNAP02545 664 aaKnown RBP17.92■□□□□ 0.46
VARS-215ENST00000375663 PSMA2P25787 234 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 SLC12A2P55011 1212 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 KYNUQ16719 465 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 WDR59Q6PJI9 974 aa17.92■□□□□ 0.46
VARS-215ENST00000375663 ZC3H18Q86VM9 953 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms