RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 TAF5Q15542 800 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SARM1Q6SZW1 724 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CEP295NLQ96MC4 621 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 XPO6Q96QU8 1125 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 NUDT12Q9BQG2 462 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC134Q9H6E4 229 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC86Q9H6F5 360 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SETD4Q9NVD3 440 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CPP00450 1065 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 GNAI2P04899 355 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 C3orf33Q6P1S2 294 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PIK3AP1Q6ZUJ8 805 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SYT2Q8N9I0 419 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CYGBQ8WWM9 190 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 S100ZQ8WXG8 99 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CUEDC2Q9H467 287 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RNF41Q9H4P4 317 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SNX7Q9UNH6 387 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 A0A1B0GVL5 298 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 H0Y3Z8 333 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PPP6R2O75170 966 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SNAPC5O75971 98 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 OR7A10O76100 309 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 POLR2BP30876 1174 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 IFNAR2P48551 515 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RBBP4Q09028 425 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 C1DQ13901 141 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 AKNAD1Q5T1N1 836 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 POMGNT2Q8NAT1 580 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 DNAAF1Q8NEP3 725 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PI4K2AQ9BTU6 479 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ADA2Q9NZK5 511 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PASKQ96RG2 1323 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PTGES3LE9PB15 166 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 IL1R1P14778 569 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 HSPA13P48723 471 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PSMD4P55036 377 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CDH11P55287 796 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 C5orf22Q49AR2 442 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM72Q6ZMU5 477 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 LRRC69Q6ZNQ3 347 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TSHZ1Q6ZSZ6 1077 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CAPSLQ8WWF8 208 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ZMAT5Q9UDW3 170 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 NFE2L3Q9Y4A8 694 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 MINK1Q8N4C8 1332 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 SGSM2O43147 1006 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PRODHO43272 600 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GMFGO60234 142 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 IFNA7P01567 189 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 BCRP11274 1271 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RXRAP19793 462 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GUCA1AP43080 201 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 MFAP3P55082 362 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GPR141Q7Z602 305 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SCN4BQ8IWT1 228 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC33Q8N5R6 958 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RASGEF1AQ8N9B8 481 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PIK3C3Q8NEB9 887 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 UPB1Q9UBR1 384 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF112Q9UJU3 913 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 MUSKO15146 869 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NPM3O75607 178 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GFPT2O94808 682 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 HOXA7P31268 230 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 EFTUD2Q15029 972 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SFR1Q86XK3 245 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ATP6V1G3Q96LB4 118 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL32Q96NJ5 620 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TEX13BQ9BXU2 312 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM3O75382 744 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SERPINA1P01009 418 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PET100P0DJ07 73 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SERPINB4P48594 390 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RGS8P57771 180 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 YWHAZP63104 245 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RAPGEF1Q13905 1077 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SMYD5Q6GMV2 418 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ZBTB10Q96DT7 871 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 INTS4Q96HW7 963 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SMAD5Q99717 465 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 FAM167BQ9BTA0 163 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 WDR12Q9GZL7 423 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms