RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SVOPQ8N4V2 548 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PABPC3Q9H361 631 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 DTNAQ9Y4J8 743 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TMEM247A6NEH6 219 aa7□□□□□ -1.29
UBR4-204ENST00000375254 POTECB2RU33 542 aa7□□□□□ -1.29
UBR4-204ENST00000375254 EFR3AQ14156 821 aa7□□□□□ -1.29
UBR4-204ENST00000375254 C11orf74Q86VG3 221 aa7□□□□□ -1.29
UBR4-204ENST00000375254 GIMAP8Q8ND71 665 aaPredicted RBP7□□□□□ -1.29
UBR4-204ENST00000375254 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 ATXN2LQ8WWM7 1075 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 AIPL1Q9NZN9 384 aa7□□□□□ -1.29
UBR4-204ENST00000375254 FADS3Q9Y5Q0 445 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
UBR4-204ENST00000375254 LPXNO60711 386 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TALDO1P37837 337 aa7□□□□□ -1.29
UBR4-204ENST00000375254 LGALS3BPQ08380 585 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PARP10Q53GL7 1025 aa7□□□□□ -1.29
UBR4-204ENST00000375254 C6orf10Q5SRN2 563 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TRIM51Q9BSJ1 452 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PHACTR1Q9C0D0 580 aa7□□□□□ -1.29
UBR4-204ENST00000375254 RNPEPQ9H4A4 650 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DAPK2Q9UIK4 370 aa7□□□□□ -1.29
UBR4-204ENST00000375254 KCNQ3O43525 872 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ACSL3O95573 720 aa7□□□□□ -1.29
UBR4-204ENST00000375254 CALB1P05937 261 aa7□□□□□ -1.29
UBR4-204ENST00000375254 APOA4P06727 396 aa7□□□□□ -1.29
UBR4-204ENST00000375254 KRT20P35900 424 aa7□□□□□ -1.29
UBR4-204ENST00000375254 POLR2FP61218 127 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 RESTQ13127 1097 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MMRN1Q13201 1228 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SRPRBQ9Y5M8 271 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 CCDC61Q9Y6R9 512 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SLC9A1P19634 815 aa7□□□□□ -1.29
UBR4-204ENST00000375254 BFSP2Q13515 415 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MAB21L3Q8N8X9 362 aa7□□□□□ -1.29
UBR4-204ENST00000375254 AURKCQ9UQB9 309 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SSU72P8A0A1W2PR75 194 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MAP2K7O14733 419 aa7□□□□□ -1.29
UBR4-204ENST00000375254 FGGP02679 453 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TGFBR2P37173 567 aa7□□□□□ -1.29
UBR4-204ENST00000375254 FAAH2Q6GMR7 532 aa7□□□□□ -1.29
UBR4-204ENST00000375254 USP13Q92995 863 aaPredicted RBP7□□□□□ -1.29
UBR4-204ENST00000375254 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 TSSK1BQ9BXA7 367 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PNMA2Q9UL42 364 aa7□□□□□ -1.29
UBR4-204ENST00000375254 NR5A1Q13285 461 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SYCE2Q6PIF2 218 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TTC6Q86TZ1 520 aa7□□□□□ -1.29
UBR4-204ENST00000375254 BBS7Q8IWZ6 715 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PIGUQ9H490 435 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SMARCAL1Q9NZC9 954 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DCTN4Q9UJW0 460 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MAN1B1Q9UKM7 699 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ARHGEF37A1IGU5 675 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DDHD2O94830 711 aa7□□□□□ -1.29
UBR4-204ENST00000375254 GPC5P78333 572 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PGBD1Q96JS3 809 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PTPN22Q9Y2R2 807 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TTC21BQ7Z4L5 1316 aa7□□□□□ -1.29
UBR4-204ENST00000375254 NPR3P17342 541 aa7□□□□□ -1.29
UBR4-204ENST00000375254 PSMC6P62333 389 aa7□□□□□ -1.29
UBR4-204ENST00000375254 CALCRLQ16602 461 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SLC9C2Q5TAH2 1124 aa7□□□□□ -1.29
UBR4-204ENST00000375254 CYP4F22Q6NT55 531 aa7□□□□□ -1.29
UBR4-204ENST00000375254 AMER2Q8N7J2 671 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SYN2Q92777 582 aaPredicted RBP7□□□□□ -1.29
UBR4-204ENST00000375254 KATNAL1Q9BW62 490 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MAGEE1Q9HCI5 957 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MLXQ9UH92 298 aa7□□□□□ -1.29
UBR4-204ENST00000375254 EIF2B5Q13144 721 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 MARK2Q7KZI7 788 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 WDR36Q8NI36 951 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 BTBD10Q9BSF8 475 aa7□□□□□ -1.29
UBR4-204ENST00000375254 EFCAB1Q9HAE3 211 aa7□□□□□ -1.29
UBR4-204ENST00000375254 KDM3AQ9Y4C1 1321 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ARHGEF6Q15052 776 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TMED2Q15363 201 aa7□□□□□ -1.29
UBR4-204ENST00000375254 TMTC4Q5T4D3 741 aa7□□□□□ -1.29
UBR4-204ENST00000375254 IYDQ6PHW0 289 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ADSSL1Q8N142 457 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DLG3Q92796 817 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ALKBH5Q6P6C2 394 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 POLNQ7Z5Q5 900 aa7□□□□□ -1.29
UBR4-204ENST00000375254 MROH2BQ7Z745 1585 aa7□□□□□ -1.29
UBR4-204ENST00000375254 CYGBQ8WWM9 190 aa7□□□□□ -1.29
UBR4-204ENST00000375254 RAPGEF5Q92565 580 aa7□□□□□ -1.29
UBR4-204ENST00000375254 GTF3C4Q9UKN8 822 aa7□□□□□ -1.29
UBR4-204ENST00000375254 GRK2P25098 689 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DPCR1Q3MIW9 517 aa7□□□□□ -1.29
UBR4-204ENST00000375254 DGKKQ5KSL6 1271 aa7□□□□□ -1.29
UBR4-204ENST00000375254 ARL6IP4Q66PJ3 421 aaKnown RBP7□□□□□ -1.29
UBR4-204ENST00000375254 SH3TC2Q8TF17 1288 aa7□□□□□ -1.29
UBR4-204ENST00000375254 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 ITIH6Q6UXX5 1313 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 PJA2O43164 708 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 MTSS1O43312 755 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 MTRF1O75570 445 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms