RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SIRT5Q9NXA8 310 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 CROTQ9UKG9 612 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 MAPK8IP3Q9UPT6 1336 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 WTIPA6NIX2 430 aaPredicted RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 ABLIM3O94929 683 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 RARGP13631 454 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 GAP43P17677 238 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 CDH3P22223 829 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 ATP5F1P24539 256 aaPredicted RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 ZNF280AP59817 542 aaPredicted RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 SLC9A5Q14940 896 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 NOLC1Q14978 699 aaKnown RBP eCLIP9.76□□□□□ -0.85
UBR4-201ENST00000375218 TAF12Q16514 161 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 TMEM154Q6P9G4 183 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 AFAP1L2Q8N4X5 818 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 KRT35Q92764 455 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 GFM2Q969S9 779 aaKnown RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 VPS39Q96JC1 886 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 CORO1BQ9BR76 489 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 MAN1C1Q9NR34 630 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 H0Y626 953 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 FAM13AO94988 1023 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 S100A6P06703 90 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ATP4AP20648 1035 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 AK2P54819 239 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CLUL1Q15846 466 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ABRAXAS1Q6UWZ7 409 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CCDC83Q8IWF9 413 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ZBTB44Q8NCP5 570 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 MOSPD2Q8NHP6 518 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 EZH1Q92800 747 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 RSAD1Q9HA92 442 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 PDLIM7Q9NR12 457 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 NRXN2Q9P2S2 1712 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CCDC169A6NNP5 214 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 MASP2O00187 686 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 VWA5AO00534 786 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 PECAM1P16284 738 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 DSG2Q14126 1118 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CWF19L2Q2TBE0 894 aaKnown RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 GPR139Q6DWJ6 353 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 B4GALNT2Q8NHY0 566 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 MIEF2Q96C03 454 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CCDC138Q96M89 665 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CTAGE1Q96RT6 745 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 LSM14BQ9BX40 385 aaKnown RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 COL11A2P13942 1736 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 SGSM2O43147 1006 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ALOX15P16050 662 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 ABCB4P21439 1286 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 MARCH10Q8NA82 808 aaPredicted RBP9.75□□□□□ -0.85
UBR4-201ENST00000375218 PIGBQ92521 554 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 MOSPD1Q9UJG1 213 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 PLAAQ9Y263 795 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 CHD4Q14839 1912 aa9.75□□□□□ -0.85
UBR4-201ENST00000375218 GAKO14976 1311 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 C9IYK1 514 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 UBAP1LF5GYI3 381 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 TXNL1O43396 289 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 URI1O94763 535 aaPredicted RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 CYP2A6P11509 494 aaPredicted RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 IREB2P48200 963 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 GJA9P57773 515 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 SPARCL1Q14515 664 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 PI16Q6UXB8 463 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 REXO1Q8N1G1 1221 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 FBXO27Q8NI29 283 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 B3GNT4Q9C0J1 378 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 MMRN2Q9H8L6 949 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 ATP13A1Q9HD20 1204 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 DOK2O60496 412 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 TLR5O60602 858 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 KRT1P04264 644 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 MAP3K12Q12852 859 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 DSC3Q14574 896 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 SLC22A25Q6T423 547 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 PLEKHM3Q6ZWE6 761 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 IFNL1Q8IU54 200 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 SLC22A8Q8TCC7 542 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 OSGEPQ9NPF4 335 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 RPRD1BQ9NQG5 326 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 ARHGAP10A1A4S6 786 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 B2RBV5 119 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 KERAO60938 352 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 BAG2O95816 211 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 P4HA1P13674 534 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 TCF7P36402 384 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms