RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 NOMO2Q5JPE7 1267 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 ZNF280BQ86YH2 543 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 GPATCH3Q96I76 525 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 SLC9A2Q9UBY0 812 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 COL1A2P08123 1366 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 NOTCH4Q99466 2003 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 SDK1Q7Z5N4 2213 aa11.48□□□□□ -0.57
HLA-DRA-201ENST00000374982 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 TGM5O43548 720 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 HBP1O60381 514 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 C22orf31O95567 290 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 PRB1P04280 392 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 FGFR4P22455 802 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 MPLP40238 635 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 RAP1GAPP47736 663 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 ACTR2P61160 394 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 C19orf57Q0VDD7 668 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 MTMR1Q13613 665 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 SLC35G1Q2M3R5 365 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 TAS1R1Q7RTX1 841 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 SMARCC2Q8TAQ2 1214 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 ESR2Q92731 530 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 PIGSQ96S52 555 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 HERC2P3Q9BVR0 1158 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 PLA2G2FQ9BZM2 168 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 SSX2IPQ9Y2D8 614 aa11.47□□□□□ -0.57
HLA-DRA-201ENST00000374982 BPTFQ12830 3046 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 MAN2B1O00754 1011 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 ZMYND10O75800 440 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 DDHD2O94830 711 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 SEC24BO95487 1268 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 EIF4BP23588 611 aaKnown RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 HOXC13P31276 330 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 GLUD2P49448 558 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 NLRP11P59045 1033 aaKnown RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 TRAF1Q13077 416 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 GLB1LQ6UWU2 654 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 KBTBD6Q86V97 674 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 WDR5BQ86VZ2 330 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 IQCA1Q86XH1 822 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 GLYCTKQ8IVS8 523 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 SPEM1Q8N4L4 309 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 METTL13Q8N6R0 699 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 ITFG1Q8TB96 612 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 DNASE1L2Q92874 299 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 ZNF668Q96K58 619 aaPredicted RBP11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 VPS45Q9NRW7 570 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 DACT1Q9NYF0 836 aa11.46□□□□□ -0.57
HLA-DRA-201ENST00000374982 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
HLA-DRA-201ENST00000374982 UNC79Q9P2D8 2635 aa11.46□□□□□ -0.58
HLA-DRA-201ENST00000374982 ZMYM6O95789 1325 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 NRP1O14786 923 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 ECI2O75521 394 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 OFD1O75665 1012 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 PAPSS2O95340 614 aaPredicted RBP11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 CHRNB1P11230 501 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 PHKA2P46019 1235 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 SLC26A2P50443 739 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 CLCN3P51790 818 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 FAM3CQ92520 227 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 MAD2L2Q9UI95 211 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 PCDHGA5Q9Y5G8 931 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 UBIAD1Q9Y5Z9 338 aa11.45□□□□□ -0.58
HLA-DRA-201ENST00000374982 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 LILRA6Q6PI73 481 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 CACNA2D4Q7Z3S7 1137 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 GAB3Q8WWW8 586 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 LRIG1Q96JA1 1093 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 HNRNPABQ99729 332 aaKnown RBP11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 C2orf42Q9NWW7 574 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 AKT3Q9Y243 479 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 LAMA1P25391 3075 aa11.44□□□□□ -0.58
HLA-DRA-201ENST00000374982 SHROOM3Q8TF72 1996 aa11.43□□□□□ -0.58
HLA-DRA-201ENST00000374982 F5P12259 2224 aa11.43□□□□□ -0.58
HLA-DRA-201ENST00000374982 TDRD15B5MCY1 1934 aaKnown RBP11.43□□□□□ -0.58
HLA-DRA-201ENST00000374982 IGKV6D-21A0A0A0MT36 114 aa11.43□□□□□ -0.58
HLA-DRA-201ENST00000374982 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms