RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 AADACL2Q6P093 401 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 TAX1BP1Q86VP1 789 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ATXN2LQ8WWM7 1075 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 NAP1L3Q99457 506 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 TXLNGYQ9BZA5 131 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 BCAS3Q9H6U6 928 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ZDHHC18Q9NUE0 388 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 INTUQ9ULD6 942 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 DDX3YO15523 660 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 TTLL1O95922 423 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ANXA13P27216 316 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 MMP13P45452 471 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 CCDC38Q502W7 563 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 UBAP2Q5T6F2 1119 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 EP400NLQ6ZTU2 488 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 METTL14Q9HCE5 456 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 RASAL2Q9UJF2 1139 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 SYNPO2Q9UMS6 1093 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 SBF1O95248 1867 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 NUDT17P0C025 328 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 FGFR4P22455 802 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 CYP4A11Q02928 519 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 TRPM8Q7Z2W7 1104 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
CCDC40-203ENST00000374877 DYDC1Q8WWB3 177 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 C18orf8Q96DM3 657 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ARHGEF26Q96DR7 871 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 IKZF4Q9H2S9 585 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 ADAM7Q9H2U9 754 aa11.97□□□□□ -0.49
CCDC40-203ENST00000374877 SFI1A8K8P3 1242 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 TMEM110-MUSTN1A8MSY1 372 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 PDXKO00764 312 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 ASAP2O43150 1006 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 KLRC3Q07444 240 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 PLS1Q14651 629 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 PRR16Q569H4 304 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 MGARPQ8TDB4 240 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 PGM2Q96G03 612 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 CARD9Q9H257 536 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 ABCF3Q9NUQ8 709 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
CCDC40-203ENST00000374877 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
CCDC40-203ENST00000374877 TBCAO75347 108 aaKnown RBP11.96□□□□□ -0.5
CCDC40-203ENST00000374877 SOX5P35711 763 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 MAPK7Q13164 816 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 ITIH4Q14624 930 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 DRAP1Q14919 205 aaPredicted RBP11.96□□□□□ -0.5
CCDC40-203ENST00000374877 CCDC25Q86WR0 208 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 ALG3Q92685 438 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 MKL1Q969V6 931 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.5
CCDC40-203ENST00000374877 RNF181Q9P0P0 153 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.5
CCDC40-203ENST00000374877 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 ASTN1O14525 1302 aa11.96□□□□□ -0.5
CCDC40-203ENST00000374877 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 TMEM253P0C7T8 217 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 PPP2R5EQ16537 467 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ZDHHC24Q6UX98 284 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 NSRP1Q9H0G5 558 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 THAP2Q9H0W7 228 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 TAS2R14Q9NYV8 317 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 SLC12A4Q9UP95 1085 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 TRPC6Q9Y210 931 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 MPHOSPH10O00566 681 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ZBTB5O15062 677 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 PAX7P23759 505 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 LRRC14Q15048 493 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 SPDYCQ5MJ68 293 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 PIGWQ7Z7B1 504 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ANO3Q9BYT9 981 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 MTRF1LQ9UGC7 380 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 DBR1Q9UK59 544 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 GSTA1P08263 222 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 PPATQ06203 517 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ADCY2Q08462 1091 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms