RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 AMPD2Q01433 879 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 BRD3Q15059 726 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 DEPTORQ8TB45 409 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 CLEC4DQ8WXI8 215 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 A1CFQ9NQ94 594 aaKnown RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 NR2E1Q9Y466 385 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 MARCKSL1P49006 195 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 TFAMQ00059 246 aaKnown RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 PRKCEQ02156 737 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 IFFO1Q0D2I5 559 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 DRP2Q13474 957 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 SNRNP35Q16560 246 aaKnown RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 ZBTB41Q5SVQ8 909 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 ANO5Q75V66 913 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 B4GALNT4Q76KP1 1039 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 RPAINQ86UA6 219 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 POLR3FQ9H1D9 316 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 PXMP2Q9NR77 195 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 MYH7BA7E2Y1 1941 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 CYP2C8P10632 490 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 SLC5A5Q92911 643 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 DCPSQ96C86 337 aaKnown RBP11.68□□□□□ -0.54
CXCL12-203ENST00000374429 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 ACCSQ96QU6 501 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 PCDHA10Q9Y5I2 948 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 IGSF9BQ9UPX0 1349 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
CXCL12-203ENST00000374429 TTI1O43156 1089 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 DAPK3O43293 454 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 RAD51CO43502 376 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ZNF862O60290 1169 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ADRB2P07550 413 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 MMEP08473 750 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 CD19P15391 556 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 TCP1P17987 556 aaKnown RBP11.67□□□□□ -0.54
CXCL12-203ENST00000374429 CYP3A7P24462 503 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 MAP2K2P36507 400 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 NOVP48745 357 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 PLTPP55058 493 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ZSCAN26Q16670 478 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ACBD3Q9H3P7 528 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 JPH1Q9HDC5 661 aaPredicted RBP11.67□□□□□ -0.54
CXCL12-203ENST00000374429 LCMT1Q9UIC8 334 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 GOLGA6CA6NDK9 693 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 GOLGA6DP0CG33 693 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 CFAP58Q5T655 872 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 IRF2BP2Q7Z5L9 587 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
CXCL12-203ENST00000374429 APOL6Q9BWW8 343 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 GOLGA6AQ9NYA3 693 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 L1RE1Q9UN81 338 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 SNX24Q9Y343 169 aa11.67□□□□□ -0.54
CXCL12-203ENST00000374429 COL5A3P25940 1745 aaPredicted RBP11.67□□□□□ -0.54
CXCL12-203ENST00000374429 PHF20L1A8MW92 1017 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 K7ERI5 159 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 GAP43P17677 238 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PSMC4P43686 418 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 ACTR2P61160 394 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 STRN3Q13033 797 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 TRAF1Q13077 416 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 SMAD1Q15797 465 aaKnown RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 RHPN2Q8IUC4 686 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 NSUN6Q8TEA1 469 aaKnown RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 CCDC114Q96M63 670 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 AMFRQ9UKV5 643 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PLIN4Q96Q06 1357 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 TBX3O15119 743 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 HSF2BPO75031 334 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 BCRP11274 1271 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 CCND2P30279 289 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 SOX5P35711 763 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PSMC5P62195 406 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 SP2Q02086 613 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 TMEM270Q6UE05 265 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PRUNE1Q86TP1 453 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PSMD1Q99460 953 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 GANQ9H2C0 597 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms