RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 ZNF541Q9H0D2 1346 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TTI1O43156 1089 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 ARHGAP25P42331 645 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 FMO5P49326 533 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 IFRD2Q12894 506 aaPredicted RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 GIT2Q14161 759 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 KIAA1755Q5JYT7 1200 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TRAPPC11Q7Z392 1133 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 GMCL1P1Q8NEA9 526 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 THOC1Q96FV9 657 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 MMP19Q99542 508 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 C11orf70Q9BRQ4 267 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 MMTAG2Q9BU76 263 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 RNF14Q9UBS8 474 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 L1RE1Q9UN81 338 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 NFKBIEO00221 500 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 TRIM66O15016 1216 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 SOX5P35711 763 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 PRKCEQ02156 737 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 MTM1Q13496 603 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 RSRC2Q7L4I2 434 aaKnown RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 C4orf32Q8N8J7 132 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 RNF149Q8NC42 400 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 SLC35G2Q8TBE7 412 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 FGFBP2Q9BYJ0 223 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 RIPK3Q9Y572 518 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 MARF1Q9Y4F3 1742 aaKnown RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 SSU72P8A0A1W2PR75 194 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 MYO1CO00159 1063 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 KLHDC7AQ5VTJ3 777 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 TMEM270Q6UE05 265 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CTAGE3PQ8IX95 158 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 SYT2Q8N9I0 419 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 SPATA20Q8TB22 786 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 C1orf54Q8WWF1 131 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 RNF25Q96BH1 459 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 POP1Q99575 1024 aaKnown RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 PDCD2LQ9BRP1 358 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CBWD1Q9BRT8 395 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 COX16Q9P0S2 106 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 AHDC1Q5TGY3 1603 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 PDE2AO00408 941 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 VWA5AO00534 786 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 IRF6O14896 467 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CLDN3O15551 220 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 RAD51CO43502 376 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 STX2P32856 288 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CYP2C19P33261 490 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 EPHX2P34913 555 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 KCNJ1P48048 391 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 STAT5BP51692 787 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 JAK3P52333 1124 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CCDC38Q502W7 563 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 CACNA2D3Q8IZS8 1091 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.38□□□□□ -1.07
HERC4-202ENST00000373700 C7orf31Q8N865 590 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 FBXO41Q8TF61 875 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 P2RX7Q99572 595 aaKnown RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 ATP6V0A4Q9HBG4 840 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 BAIAP2L1Q9UHR4 511 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 FBXL5Q9UKA1 691 aa8.38□□□□□ -1.07
HERC4-202ENST00000373700 TTC7AQ9ULT0 858 aaPredicted RBP8.38□□□□□ -1.07
HERC4-202ENST00000373700 ATP9AO75110 1047 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 ATF2P15336 505 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 PTPRAP18433 802 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 CYP2B6P20813 491 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 PON1P27169 355 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 YARSP54577 528 aaKnown RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 VGLL4Q14135 290 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 C10orf76Q5T2E6 689 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 FBXO16Q8IX29 292 aaPredicted RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 CCDC89Q8N998 374 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 MTMR9Q96QG7 549 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 INTS9Q9NV88 658 aaKnown RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 STK38LQ9Y2H1 464 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 PASKQ96RG2 1323 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 MYH13Q9UKX3 1938 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 CCL15-CCL14A0A0B4J2E2 113 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 SLITRK3O94933 977 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 CELF2O95319 508 aaKnown RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 MAGOHP61326 146 aaKnown RBP8.37□□□□□ -1.07
HERC4-202ENST00000373700 GPC5P78333 572 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 CCL15Q16663 113 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 EDRF1Q3B7T1 1238 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 TATDN1Q6P1N9 297 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
HERC4-202ENST00000373700 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms