RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 ARHGAP18Q8N392 663 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 CCDC127Q96BQ5 260 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
PGK1-201ENST00000373316 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
PGK1-201ENST00000373316 DAGLAQ9Y4D2 1042 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 PSMD3O43242 534 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 ECE2O60344 883 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■□□□ 11.8
PGK1-201ENST00000373316 TTC4O95801 387 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
PGK1-201ENST00000373316 LRRC41Q15345 812 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 NSUN6Q8TEA1 469 aaKnown RBP11.33□□□□□ -0.6
PGK1-201ENST00000373316 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
PGK1-201ENST00000373316 CFAP69A5D8W1 941 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 TCP10L2B9ZVM9 353 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 CYP2C19P33261 490 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 SERPINB4P48594 390 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 STX1BP61266 288 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ZYXQ15942 572 aaKnown RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 RIT2Q99578 217 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 DNAJC7Q99615 494 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ITIH2P19823 946 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 NAB2Q15742 525 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ERICH1Q86X53 443 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 APOBEC3FQ8IUX4 373 aaKnown RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 A0A0A6YYK5 440 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 PPARGP37231 505 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 CENPCQ03188 943 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 CYFIP1Q7L576 1253 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 TC2NQ8N9U0 490 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 TRIM55Q9BYV6 548 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 KPNA7A9QM74 516 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 PAMP19021 973 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 CDKL3Q8IVW4 592 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 SPATA4Q8NEY3 305 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 MED10Q9BTT4 135 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 FAM8A1Q9UBU6 413 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 NFU1Q9UMS0 254 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
PGK1-201ENST00000373316 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
PGK1-201ENST00000373316 K7ERI5 159 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 STXBP2Q15833 593 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 APBB2Q92870 758 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 SHISA4Q96DD7 197 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 CCDC68Q9H2F9 335 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 CNOT8Q9UFF9 292 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 NFKBIAP25963 317 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 GTF2H1P32780 548 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 MTMR1Q13613 665 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 SDCCAG3Q96C92 435 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 IL17RBQ9NRM6 502 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 ARAP2Q8WZ64 1704 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 PHF2O75151 1096 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 PYGBP11216 843 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 PHKA2P46019 1235 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 IFRD2Q12894 506 aaPredicted RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 RPS6KA2Q15349 733 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 RCOR2Q8IZ40 523 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 GPD1LQ8N335 351 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 ANKRD13CQ8N6S4 541 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 MAP3K7O43318 606 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 PDE1BQ01064 536 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 PTPAQ15257 358 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms