RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ALS2CLQ60I27 953 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 POTEAQ6S8J7 498 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 RNF207Q6ZRF8 634 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 INTS8Q75QN2 995 aaKnown RBP25.79■■□□□ 1.72
CDK9-201ENST00000373264 ANO5Q75V66 913 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 XXYLT1Q8NBI6 393 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 ALG3Q92685 438 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 ZKSCAN4Q969J2 545 aaPredicted RBP25.79■■□□□ 1.72
CDK9-201ENST00000373264 TAF1DQ9H5J8 278 aaPredicted RBP25.79■■□□□ 1.72
CDK9-201ENST00000373264 PXMP2Q9NR77 195 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 RGS17Q9UGC6 210 aaPredicted RBP25.79■■□□□ 1.72
CDK9-201ENST00000373264 PCDHB18PQ96TA0 734 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 TMEM206Q9H813 350 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 USP20Q9Y2K6 914 aa25.79■■□□□ 1.72
CDK9-201ENST00000373264 TMEM110-MUSTN1A8MSY1 372 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 DAPK3O43293 454 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 MARCKSL1P49006 195 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 GTF2BQ00403 316 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 RPUSD2Q8IZ73 545 aaKnown RBP25.78■■□□□ 1.72
CDK9-201ENST00000373264 RASGEF1CQ8N431 466 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 LMBR1Q8WVP7 490 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 LPAR1Q92633 364 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 TRIM31Q9BZY9 425 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 ERVK-5Q9HDB9 667 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 RPS6KA5O75582 802 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 IRAK1P51617 712 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 NNTQ13423 1086 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 ARHGEF16Q5VV41 709 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 NIPA1Q7RTP0 329 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 TRIM51Q9BSJ1 452 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 ISCUQ9H1K1 167 aa25.78■■□□□ 1.72
CDK9-201ENST00000373264 LOXHD1Q8IVV2 1947 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 GOLGA8KD6RF30 607 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 TRIM66O15016 1216 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 FTLP02792 175 aaPredicted RBP25.77■■□□□ 1.72
CDK9-201ENST00000373264 KREMEN1Q96MU8 473 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 DOCK5Q9H7D0 1870 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 OPA1O60313 960 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 SYCE1Q8N0S2 351 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 DPH5Q9H2P9 285 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 TBC1D22BQ9NU19 505 aa25.77■■□□□ 1.72
CDK9-201ENST00000373264 VWA5AO00534 786 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 SHOX2O60902 331 aaPredicted RBP25.76■■□□□ 1.71
CDK9-201ENST00000373264 UAP1Q16222 522 aaPredicted RBP25.76■■□□□ 1.71
CDK9-201ENST00000373264 NOP9Q86U38 636 aaKnown RBP25.76■■□□□ 1.71
CDK9-201ENST00000373264 SLC47A2Q86VL8 602 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 KRT35Q92764 455 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 PLAAQ9Y263 795 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 RGPD3A6NKT7 1758 aaPredicted RBP25.76■■□□□ 1.71
CDK9-201ENST00000373264 RGPD4Q7Z3J3 1758 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 CYP26A1O43174 497 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 ZNF862O60290 1169 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 NPTX2P47972 431 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 GHRHRQ02643 423 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 PPFIA1Q13136 1202 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 PPM1KQ8N3J5 372 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 CTDP1Q9Y5B0 961 aaPredicted RBP25.76■■□□□ 1.71
CDK9-201ENST00000373264 GRIN2DO15399 1336 aa25.76■■□□□ 1.71
CDK9-201ENST00000373264 CHRNB2P17787 502 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 MXI1P50539 228 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 PSMC5P62195 406 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 C4orf19Q8IY42 314 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 TMEM161BQ8NDZ6 487 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 BTBD6Q96KE9 485 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 LRRC4CQ9HCJ2 640 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 RNF146Q9NTX7 359 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 PPP1R1BQ9UD71 204 aaPredicted RBP25.75■■□□□ 1.71
CDK9-201ENST00000373264 TCEAL9Q9UHQ7 104 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 HACL1Q9UJ83 578 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 PFASO15067 1338 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 LYPLA2O95372 231 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 NCKAP1LP55160 1127 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 GNGT1P63211 74 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 PDCLQ13371 301 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 SNRNP35Q16560 246 aaKnown RBP25.75■■□□□ 1.71
CDK9-201ENST00000373264 SLC39A4Q6P5W5 647 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 ADGRA3Q8IWK6 1321 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 RNPC3Q96LT9 517 aaKnown RBP25.75■■□□□ 1.71
CDK9-201ENST00000373264 CAPS2Q9BXY5 557 aa25.75■■□□□ 1.71
CDK9-201ENST00000373264 ANKRD62A6NC57 917 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 MICALL2Q8IY33 904 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 DHX38Q92620 1227 aaKnown RBP25.74■■□□□ 1.71
CDK9-201ENST00000373264 CALR3Q96L12 384 aaKnown RBP25.74■■□□□ 1.71
CDK9-201ENST00000373264 CTTNBP2NLQ9P2B4 639 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 TBX20Q9UMR3 447 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 WDR64B1ANS9 1081 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 CTNND1O60716 968 aaKnown RBP25.74■■□□□ 1.71
CDK9-201ENST00000373264 RGS20O76081 388 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 ZBTB7AO95365 584 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 HSD17B3P37058 310 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 MAATS1Q7Z4T9 603 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 MREGQ8N565 214 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 WHAMMQ8TF30 809 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 ALG6Q9Y672 507 aa25.74■■□□□ 1.71
CDK9-201ENST00000373264 ATP8B3O60423 1300 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 DENND3A2RUS2 1198 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 NFKBIEO00221 500 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 TULP2O00295 520 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 CNGA1P29973 690 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms