RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NFU1Q9UMS0 254 aa20.31■□□□□ 0.84
USP49-202ENST00000373010 RAD51CO43502 376 aa20.3■□□□□ 0.84
USP49-202ENST00000373010 BUB1BO60566 1050 aaPredicted RBP20.3■□□□□ 0.84
USP49-202ENST00000373010 TRADDQ15628 312 aa20.3■□□□□ 0.84
USP49-202ENST00000373010 CEP170P1Q96L14 293 aa20.3■□□□□ 0.84
USP49-202ENST00000373010 AGPAT1Q99943 283 aa20.3■□□□□ 0.84
USP49-202ENST00000373010 AP1M1Q9BXS5 423 aa20.3■□□□□ 0.84
USP49-202ENST00000373010 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
USP49-202ENST00000373010 KCNA2P16389 499 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 RFX1P22670 979 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 TNNC1P63316 161 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 XRRA1Q6P2D8 792 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 EMBQ6PCB8 327 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 ACTRT1Q8TDG2 376 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 CASKIN2Q8WXE0 1202 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 CTNNBL1Q8WYA6 563 aaPredicted RBP20.29■□□□□ 0.84
USP49-202ENST00000373010 RFFLQ8WZ73 363 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 IWS1Q96ST2 819 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 THAP2Q9H0W7 228 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 UTRNP46939 3433 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 DENND3A2RUS2 1198 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 FAM153BP0C7A2 387 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 MXI1P50539 228 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 MAP2K1Q02750 393 aaPredicted RBP20.29■□□□□ 0.84
USP49-202ENST00000373010 FAM153CQ494X1 144 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 SYCE1Q8N0S2 351 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
USP49-202ENST00000373010 NSUN6Q8TEA1 469 aaKnown RBP20.29■□□□□ 0.84
USP49-202ENST00000373010 SCFD2Q8WU76 684 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 CCDC127Q96BQ5 260 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 FAM153AQ9UHL3 310 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 ADAMTS5Q9UNA0 930 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 NOC2LQ9Y3T9 749 aaKnown RBP20.29■□□□□ 0.84
USP49-202ENST00000373010 DAAM1Q9Y4D1 1078 aa20.29■□□□□ 0.84
USP49-202ENST00000373010 P4HA2O15460 535 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 STBD1O95210 358 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 USP8P40818 1118 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 SMTNP53814 917 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 DMP1Q13316 513 aaPredicted RBP20.28■□□□□ 0.84
USP49-202ENST00000373010 SNRNP35Q16560 246 aaKnown RBP20.28■□□□□ 0.84
USP49-202ENST00000373010 SWSAP1Q6NVH7 229 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 FMNL3Q8IVF7 1028 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 CAVIN3Q969G5 261 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 SENP7Q9BQF6 1050 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 MTFR1LQ9H019 292 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 ARID2Q68CP9 1835 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 PGRMC1O00264 195 aaKnown RBP20.28■□□□□ 0.84
USP49-202ENST00000373010 MAPK13O15264 365 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 CNGA1P29973 690 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 MAP4K3Q8IVH8 894 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 HES6Q96HZ4 224 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 C12orf42Q96LP6 360 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 POP1Q99575 1024 aaKnown RBP20.28■□□□□ 0.84
USP49-202ENST00000373010 AMFRQ9UKV5 643 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 EXOC7Q9UPT5 735 aa20.28■□□□□ 0.84
USP49-202ENST00000373010 SNRPFP62306 86 aaKnown RBP20.27■□□□□ 0.84
USP49-202ENST00000373010 PPATQ06203 517 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 KCTD19Q17RG1 926 aaPredicted RBP20.27■□□□□ 0.84
USP49-202ENST00000373010 SEMA4DQ92854 862 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.84
USP49-202ENST00000373010 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
USP49-202ENST00000373010 CYP39A1Q9NYL5 469 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 PFASO15067 1338 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 OAZ1P54368 228 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 PAK2Q13177 524 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 PRKG1Q13976 671 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 SLC39A4Q6P5W5 647 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 COG5Q9UP83 839 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
USP49-202ENST00000373010 ITGA4P13612 1032 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 CATSPERGQ6ZRH7 1159 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 RPUSD2Q8IZ73 545 aaKnown RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 SLC17A8Q8NDX2 589 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 ELMO3Q96BJ8 720 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 ADGRA3Q8IWK6 1321 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 CCDC66A2RUB6 948 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 ANKRD62A6NC57 917 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 C19orf81C9J6K1 198 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 MAFGO15525 162 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 SGPL1O95470 568 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 GUCY2FP51841 1108 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 APOBEC3FQ8IUX4 373 aaKnown RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 CCDC60Q8IWA6 550 aaPredicted RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 ATP6V0A1Q93050 837 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 KLRG1Q96E93 195 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 KREMEN1Q96MU8 473 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 TEX13BQ9BXU2 312 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 DDX47Q9H0S4 455 aaKnown RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 JPH1Q9HDC5 661 aaPredicted RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 ACP6Q9NPH0 428 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 GGA3Q9NZ52 723 aa20.26■□□□□ 0.83
USP49-202ENST00000373010 SEPT9Q9UHD8 586 aaPredicted RBP20.26■□□□□ 0.83
USP49-202ENST00000373010 PSAPP07602 524 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 CAPN2P17655 700 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms