RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ANXA13P27216 316 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 PDE6CP51160 858 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 ZNF268Q14587 947 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 MESDQ14696 234 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 GNPTABQ3T906 1256 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 KCNV2Q8TDN2 545 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 HOOK2Q96ED9 719 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 GPR88Q9GZN0 384 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 NSRP1Q9H0G5 558 aaKnown RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 CD209Q9NNX6 404 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 CTNNAL1Q9UBT7 734 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 NCANO14594 1321 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 PHF2O75151 1096 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 FMO5P49326 533 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 ARMC2Q8NEN0 867 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 CYP2W1Q8TAV3 490 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 USP15Q9Y4E8 981 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 ROBO1Q9Y6N7 1651 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 CFAP73A6NFT4 308 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 ATMINO43313 823 aaPredicted RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 QRICH1Q2TAL8 776 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 CRELD2Q6UXH1 353 aaPredicted RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 DIS3Q9Y2L1 958 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 TMEM120BA0PK00 339 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 TOM1O60784 492 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 GH1P01241 217 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 PYGMP11217 842 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 RPA1P27694 616 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 PSMC2P35998 433 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 DRG2P55039 364 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 RIPK1Q13546 671 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 PPP2R5EQ16537 467 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 PPP1R18Q6NYC8 613 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 ARHGEF2Q92974 986 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 BORCS6Q96GS4 357 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 BTBD6Q96KE9 485 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 NARFQ9UHQ1 456 aa14.74□□□□□ -0.05
USP49-201ENST00000373006 CNOT7Q9UIV1 285 aaKnown RBP14.74□□□□□ -0.05
USP49-201ENST00000373006 XIRP1Q702N8 1843 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 ANKRD62A6NC57 917 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 FAM86B1E9PN63 330 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 SLC16A3O15427 465 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 FAM86B2P0C5J1 330 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 CHRNA3P32297 505 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP49-201ENST00000373006 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 PHLDB3Q6NSJ2 640 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 TAOK1Q7L7X3 1001 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 ERICH1Q86X53 443 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 SLFN12Q8IYM2 578 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 ERMNQ8TAM6 284 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 ZNF570Q96NI8 536 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 MYO3BQ8WXR4 1341 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 SEPT14Q6ZU15 432 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 BZW1Q7L1Q6 419 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 FITM2Q8N6M3 262 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 ETNPPLQ8TBG4 499 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 SYT11Q9BT88 431 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 MXD3Q9BW11 206 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 PCDHA3Q9Y5H8 950 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 NAV1Q8NEY1 1877 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 COMTP21964 271 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 GPSM2P81274 684 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 USH1GQ495M9 461 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 CDCA7Q9BWT1 371 aaPredicted RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 INTS2Q9H0H0 1204 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 CCDC134Q9H6E4 229 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 NOP53Q9NZM5 478 aaKnown RBP14.73□□□□□ -0.05
USP49-201ENST00000373006 TBK1Q9UHD2 729 aa14.73□□□□□ -0.05
USP49-201ENST00000373006 PFASO15067 1338 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 RARGP13631 454 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 COPS2P61201 443 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 SHROOM1Q2M3G4 852 aaPredicted RBP14.72□□□□□ -0.05
USP49-201ENST00000373006 ZNF483Q8TF39 744 aaPredicted RBP14.72□□□□□ -0.05
USP49-201ENST00000373006 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
USP49-201ENST00000373006 RABGAP1Q9Y3P9 1069 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 GTPBP10A4D1E9 387 aaKnown RBP14.72□□□□□ -0.05
USP49-201ENST00000373006 PODXLO00592 558 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 MEIS2O14770 477 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 SUN1O94901 812 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 SLC8A3P57103 927 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 TNIP1Q15025 636 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 MAB21L3Q8N8X9 362 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 APEX2Q9UBZ4 518 aa14.72□□□□□ -0.05
USP49-201ENST00000373006 SYNGAP1Q96PV0 1343 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 EML1O00423 815 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms