RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 DENND2CQ68D51 928 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MCF2L2Q86YR7 1114 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 LRRC49Q8IUZ0 686 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 SUN5Q8TC36 379 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 AP1M1Q9BXS5 423 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 TTC34A8MYJ7 566 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 E7EWF7 191 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 HAUS5O94927 633 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 GJB6O95452 261 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 PSMG1O95456 288 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 HOXD10P28358 340 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 GRIA2P42262 883 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MAGEA1P43355 309 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 CDR2Q01850 454 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 EHHADHQ08426 723 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 KCNMA1Q12791 1236 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 ITGA9Q13797 1035 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 GIT2Q14161 759 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MYLK3Q32MK0 819 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 Q6ZNX1 250 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 TBC1D16Q8TBP0 767 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 COX4I2Q96KJ9 171 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 NOX5Q96PH1 765 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 TTC1Q99614 292 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 CUEDC2Q9H467 287 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 RFX7Q2KHR2 1363 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 FAM47E-STBD1D6RA91 191 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 E9PBE3 544 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ADCY6O43306 1168 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 KRT75O95678 551 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ENO2P09104 434 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 CHRNA2Q15822 529 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ZFYVE27Q5T4F4 411 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 C3orf62Q6ZUJ4 267 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 BBS5Q8N3I7 341 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 SH3TC2Q8TF17 1288 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 VPS50Q96JG6 964 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ERP44Q9BS26 406 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 KRT82Q9NSB4 513 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 SCHIP1Q9P0W5 487 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ZMAT5Q9UDW3 170 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 DBR1Q9UK59 544 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TRAF3IP3Q9Y228 551 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TELO2Q9Y4R8 837 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 FUOMA2VDF0 154 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 B3GALNT1O75752 331 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 OAS1P00973 400 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ATP6V1B1P15313 513 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 C4orf50Q6ZRC1 276 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TMC3Q7Z5M5 1100 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 VPS52Q8N1B4 723 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 PURBQ96QR8 312 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 STRN4Q9NRL3 753 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ENPP1P22413 925 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 GTF2H1P32780 548 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 GRIN1Q05586 938 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 MED21Q13503 144 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 CNGA2Q16280 664 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ACSBG2Q5FVE4 666 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TCP11X2Q5H9J9 407 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 CDK5RAP3Q96JB5 506 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 TGS1Q96RS0 853 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 DDX47Q9H0S4 455 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 DNAJC17Q9NVM6 304 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
TRERF1-203ENST00000372917 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
TRERF1-203ENST00000372917 WDR91A4D1P6 747 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 SEMA3EO15041 775 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 TMCC2O75069 709 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 UBL4AP11441 157 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 HOXD13P35453 343 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 POLGP54098 1239 aaPredicted RBP11.36□□□□□ -0.59
TRERF1-203ENST00000372917 ATP1A4Q13733 1029 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 CNGA3Q16281 694 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 SNRNP48Q6IEG0 339 aaKnown RBP11.36□□□□□ -0.59
TRERF1-203ENST00000372917 ANKMY2Q8IV38 441 aa11.36□□□□□ -0.59
TRERF1-203ENST00000372917 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms