RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 IPO5O00410 1097 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 PHF2O75151 1096 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 FTLP02792 175 aaPredicted RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 DRP2Q13474 957 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 SYCP3Q8IZU3 236 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 PRELID2Q8N945 189 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 VTI1AQ96AJ9 217 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 PABPC3Q9H361 631 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 EHMT1Q9H9B1 1298 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■■■■■ 42.6
CTPS1-202ENST00000372621 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 FAM170AA1A519 330 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 TISP43B9A030 160 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 CAND2O75155 1236 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 MTA2O94776 668 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 SHBGP04278 402 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 CD101Q93033 1021 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■□□ 19
CTPS1-202ENST00000372621 CENPTQ96BT3 561 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 ZSWIM1Q9BR11 485 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
CTPS1-202ENST00000372621 K7ENM7 598 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PLA2G6O60733 806 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 MARCKSL1P49006 195 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 VAMP7P51809 220 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PMS2P54278 862 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 FBXO25Q8TCJ0 367 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PLEKHO2Q8TD55 490 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 TATDN2Q93075 761 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
CTPS1-202ENST00000372621 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 CNOT10Q9H9A5 744 aaKnown RBP13.76□□□□□ -0.21
CTPS1-202ENST00000372621 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PSME4Q14997 1843 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 RPTORQ8N122 1335 aa13.76□□□□□ -0.21
CTPS1-202ENST00000372621 PMM2O15305 246 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 MMP10P09238 476 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ALAS1P13196 640 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 KRT13P13646 458 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 HSPA6P17066 643 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CHRNB2P17787 502 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ITGB5P18084 799 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CHRNA3P32297 505 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 GPC5P78333 572 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
CTPS1-202ENST00000372621 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 PGM2Q96G03 612 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 PCDHB18PQ96TA0 734 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 NOCTQ9UK39 431 aaKnown RBP13.75□□□□□ -0.21
CTPS1-202ENST00000372621 BCS1LQ9Y276 419 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 SNX24Q9Y343 169 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 RTN2O75298 545 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 PPARDQ03181 441 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ALCAMQ13740 583 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 SWT1Q5T5J6 900 aaKnown RBP13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ERMARDQ5T6L9 678 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 TTC27Q6P3X3 843 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ARMC9Q7Z3E5 817 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CBWD1Q9BRT8 395 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 PCIF1Q9H4Z3 704 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 MAPK13O15264 365 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 DHX15O43143 795 aaKnown RBP13.75□□□□□ -0.21
CTPS1-202ENST00000372621 PLTPP55058 493 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 HOOK3Q86VS8 718 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 SEC16BQ96JE7 1060 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 OSBPL7Q9BZF2 842 aa13.75□□□□□ -0.21
CTPS1-202ENST00000372621 GGPS1O95749 300 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 GCLMP48507 274 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 CYP1B1Q16678 543 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 RNF187Q5TA31 235 aaPredicted RBP13.74□□□□□ -0.21
CTPS1-202ENST00000372621 FAM71AQ8IYT1 594 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 EPS8L1Q8TE68 723 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 ADAM7Q9H2U9 754 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
CTPS1-202ENST00000372621 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 DBR1Q9UK59 544 aaKnown RBP13.74□□□□□ -0.21
CTPS1-202ENST00000372621 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 GZMAP12544 262 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 DRD4P21917 467 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 COMTP21964 271 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 RPL21P46778 160 aaKnown RBP13.74□□□□□ -0.21
CTPS1-202ENST00000372621 HSD17B4P51659 736 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms