RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 RGS2P41220 211 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 GNGT1P63211 74 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 DR1Q01658 176 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 DHX9Q08211 1270 aaKnown RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 NBPF9Q3BBW0 867 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 BTBD8Q5XKL5 378 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 ZNF746Q6NUN9 644 aaPredicted RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 CHMP6Q96FZ7 201 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 HBP1O60381 514 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 ACOT2P49753 483 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 EPHB4P54760 987 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 C2orf54Q08AI8 447 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 TAAR1Q96RJ0 339 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 MOSPD1Q9UJG1 213 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 SOX5P35711 763 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 CPT1AP50416 773 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 BACE1P56817 501 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 KCNB1Q14721 858 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 C10orf67Q8IYJ2 551 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 TTC13Q8NBP0 860 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 KLC2Q9H0B6 622 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 KCNH7Q9NS40 1196 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 SNX9Q9Y5X1 595 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 FOXN1O15353 648 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 FAM102AQ5T9C2 384 aaPredicted RBP15.73■□□□□ 0.11
NDC1-201ENST00000371429 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 SPON2Q9BUD6 331 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 HEMGNQ9BXL5 484 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 ARHGAP25P42331 645 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 RBP5P82980 135 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 GLB1LQ6UWU2 654 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 IRAK4Q9NWZ3 460 aa15.73■□□□□ 0.11
NDC1-201ENST00000371429 MT-ND3P03897 115 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 GCLCP48506 637 aaPredicted RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 ADCY1Q08828 1119 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 KRT33BQ14525 404 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 JADE1Q6IE81 842 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 FRMD5Q7Z6J6 570 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 VPS39Q96JC1 886 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 SIK2Q9H0K1 926 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 VCXQ9H320 206 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 SENP2Q9HC62 589 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 ABHD10Q9NUJ1 306 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 HSPBP1Q9NZL4 362 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 ARHGAP42A6NI28 874 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 ICAM1P05362 532 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 SLMAPQ14BN4 828 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 FAF2Q96CS3 445 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 REEP2Q9BRK0 252 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 VCX3BQ9H321 246 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 KCND2Q9NZV8 630 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 RALAP11233 206 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 IL9RQ01113 521 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 NME3Q13232 169 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 EFHC2Q5JST6 749 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 NBPF12Q5TAG4 269 aaPredicted RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 CC2D1AQ6P1N0 951 aaPredicted RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 RRN3P2A6NIE6 340 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 SART1O43290 800 aaKnown RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 PLS3P13797 630 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 EFCAB12Q6NXP0 572 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 SPATA2LQ8IUW3 424 aaPredicted RBP15.72■□□□□ 0.11
NDC1-201ENST00000371429 PYROXD1Q8WU10 500 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 CFAP36Q96G28 342 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 TRIM62Q9BVG3 475 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 ABCF3Q9NUQ8 709 aa15.72■□□□□ 0.11
NDC1-201ENST00000371429 PREX1Q8TCU6 1659 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 CNTNAP5Q8WYK1 1306 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 FTLP02792 175 aaPredicted RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 KIAA1755Q5JYT7 1200 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 KCTD16Q68DU8 428 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 CENPUQ71F23 418 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 LRRC71Q8N4P6 559 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 FSD1LQ9BXM9 530 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 IFNAR2P48551 515 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 TMEM132DQ14C87 1099 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 TMED2Q15363 201 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 SPOPLQ6IQ16 392 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 PLEKHH3Q7Z736 793 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 ZNF564Q8TBZ8 553 aaPredicted RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 RAB3IPQ96QF0 476 aaPredicted RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 INTS9Q9NV88 658 aaKnown RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 PALMO75781 387 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 APPL2Q8NEU8 664 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 DHX38Q92620 1227 aaKnown RBP15.71■□□□□ 0.11
NDC1-201ENST00000371429 HPS3Q969F9 1004 aa15.71■□□□□ 0.11
NDC1-201ENST00000371429 ITGA4P13612 1032 aa15.71■□□□□ 0.1
NDC1-201ENST00000371429 ACCSLQ4AC99 568 aa15.71■□□□□ 0.1
NDC1-201ENST00000371429 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.1
NDC1-201ENST00000371429 NUP85Q9BW27 656 aa15.71■□□□□ 0.1
NDC1-201ENST00000371429 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
NDC1-201ENST00000371429 KRT7P08729 469 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms