RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
VPS37B-202ENST00000371248 USP20Q9Y2K6 914 aa19.36■□□□□ 0.69
VPS37B-202ENST00000371248 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 LRSAM1Q6UWE0 723 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 LRRC8DQ7L1W4 858 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 MAP4K3Q8IVH8 894 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 SYCP3Q8IZU3 236 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 DNAJC25Q9H1X3 360 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 PRDM5Q9NQX1 630 aaPredicted RBP19.35■□□□□ 0.69
VPS37B-202ENST00000371248 PRMT7Q9NVM4 692 aaPredicted RBP19.35■□□□□ 0.69
VPS37B-202ENST00000371248 DACH1Q9UI36 760 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 NOC2LQ9Y3T9 749 aaKnown RBP19.35■□□□□ 0.69
VPS37B-202ENST00000371248 UBE4BO95155 1302 aa19.35■□□□□ 0.69
VPS37B-202ENST00000371248 EDN1P05305 212 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 PPP1R2P41236 205 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 KNOP1Q1ED39 458 aaKnown RBP19.34■□□□□ 0.69
VPS37B-202ENST00000371248 ANO6Q4KMQ2 910 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 C11orf57Q6ZUT1 292 aaPredicted RBP19.34■□□□□ 0.69
VPS37B-202ENST00000371248 OSBPL7Q9BZF2 842 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 SCN5AQ14524 2016 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 ACKR2O00590 384 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 PSMA7O14818 248 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 RPS6KA5O75582 802 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 GHRP10912 638 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 CATSPER4Q7RTX7 472 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 BICD1Q96G01 975 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 EXOC7Q9UPT5 735 aa19.34■□□□□ 0.69
VPS37B-202ENST00000371248 TANC1Q9C0D5 1861 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 TTLL13PA6NNM8 815 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 B4GALT5O43286 388 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 ERLIN2O94905 339 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.69
VPS37B-202ENST00000371248 CYP2C18P33260 490 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 CCL23P55773 120 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 ZNF445P59923 1031 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 PRPF4BQ13523 1007 aaKnown RBP19.33■□□□□ 0.69
VPS37B-202ENST00000371248 MBTPS1Q14703 1052 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 FAM187BQ17R55 369 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 DHTKD1Q96HY7 919 aaPredicted RBP19.33■□□□□ 0.69
VPS37B-202ENST00000371248 CTNND2Q9UQB3 1225 aa19.33■□□□□ 0.69
VPS37B-202ENST00000371248 ZMYM2Q9UBW7 1377 aa19.33■□□□□ 0.68
VPS37B-202ENST00000371248 TRIM43BA6NCK2 446 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 LPIN1Q14693 890 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 AMHR2Q16671 573 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 FAM228AQ86W67 206 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 NELFBQ8WX92 580 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 TRIM43Q96BQ3 446 aaPredicted RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 SCLYQ96I15 445 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 HTATIP2Q9BUP3 242 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 TARS2Q9BW92 718 aaKnown RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 MRPL4Q9BYD3 311 aaKnown RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 KCTD10Q9H3F6 313 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 SEMA6BQ9H3T3 888 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 AGO3Q9H9G7 860 aaKnown RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 HNRNPDLO14979 420 aaKnown RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 STX17P56962 302 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 NFX1Q12986 1120 aaKnown RBP19.32■□□□□ 0.68
VPS37B-202ENST00000371248 PAK1Q13153 545 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 TMEM132AQ24JP5 1023 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 WNT8AQ9H1J5 351 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 ST3GAL5Q9UNP4 418 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 SQORQ9Y6N5 450 aa19.32■□□□□ 0.68
VPS37B-202ENST00000371248 TGFB1I1O43294 461 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TSPAN1O60635 241 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 CCNE1P24864 410 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 LIG4P49917 911 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 PCBP1Q15365 356 aaKnown RBP eCLIP19.31■□□□□ 0.68
VPS37B-202ENST00000371248 CENPPQ6IPU0 288 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 P2RX5Q93086 422 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 CPB2Q96IY4 423 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 PRDM4Q9UKN5 801 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TRIM49BA6NDI0 452 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TISP43B9A030 160 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 ANKRD63C9JTQ0 380 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 KIAA0355O15063 1070 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 GPR182O15218 404 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 CD52P31358 61 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 PMS1P54277 932 aaKnown RBP19.31■□□□□ 0.68
VPS37B-202ENST00000371248 NCBP1Q09161 790 aaKnown RBP19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 USP38Q8NB14 1042 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 ACO2Q99798 780 aaKnown RBP19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TYW1Q9NV66 732 aaKnown RBP19.31■□□□□ 0.68
VPS37B-202ENST00000371248 PADI3Q9ULW8 664 aa19.31■□□□□ 0.68
VPS37B-202ENST00000371248 TET1Q8NFU7 2136 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 PDXKO00764 312 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 TIMP1P01033 207 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 PIGRP01833 764 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 RAG1P15918 1043 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 ARF4P18085 180 aaPredicted RBP19.3■□□□□ 0.68
VPS37B-202ENST00000371248 ITGB8P26012 769 aa19.3■□□□□ 0.68
VPS37B-202ENST00000371248 ERCC5P28715 1186 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms