RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LCTP09848 1927 aa13.9□□□□□ -0.19
GPC3-201ENST00000370818 SORBS3O60504 671 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 KLRC1P26715 233 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 ACTR2P61160 394 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 NAB2Q15742 525 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 BSNDQ8WZ55 320 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 CEP170P1Q96L14 293 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 ALS2CR12Q96Q35 445 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 HSPBP1Q9NZL4 362 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 CSADQ9Y600 493 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 AGPSO00116 658 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 IRF6O14896 467 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 PPP1R12AO14974 1030 aaPredicted RBP13.89□□□□□ -0.19
GPC3-201ENST00000370818 PFASO15067 1338 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 PSAPP07602 524 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 ADSSP30520 456 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 GGCXP38435 758 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 ANKRD35Q8N283 1001 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 BCAS4Q8TDM0 211 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 IWS1Q96ST2 819 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 GPR88Q9GZN0 384 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 CAPN7Q9Y6W3 813 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 PTPRFP10586 1907 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 KIAA1217Q5T5P2 1943 aa13.89□□□□□ -0.19
GPC3-201ENST00000370818 F8VZ95 297 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 STXBP2Q15833 593 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 RIOX2Q8IUF8 465 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 CREG2Q8IUH2 290 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 OLIG1Q8TAK6 271 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 FAM76AQ8TAV0 307 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 PLEKHO2Q8TD55 490 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 ZNF526Q8TF50 670 aaPredicted RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 NTPCRQ9BSD7 190 aaKnown RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 MYO1FO00160 1098 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 PRLRP16471 622 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 MYL7Q01449 175 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 PRKCEQ02156 737 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 PPP3CAQ08209 521 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 DMP1Q13316 513 aaPredicted RBP13.88□□□□□ -0.19
GPC3-201ENST00000370818 MAP4K3Q8IVH8 894 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 SLC17A8Q8NDX2 589 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 ELP3Q9H9T3 547 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 XPNPEP1Q9NQW7 623 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 DNAJC12Q9UKB3 198 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 OTOFQ9HC10 1997 aa13.88□□□□□ -0.19
GPC3-201ENST00000370818 EMSYQ7Z589 1322 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 A0A0G2JLL6 359 aaPredicted RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 EVI5O60447 810 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 YBX3P16989 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
GPC3-201ENST00000370818 ELF1P32519 619 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 ICAM3P32942 547 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 VAMP7P51809 220 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 SNRPFP62306 86 aaKnown RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 NEDD9Q14511 834 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 MOB2Q70IA6 237 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 PRRT2Q7Z6L0 340 aaPredicted RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 IGSF9BQ9UPX0 1349 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 NCK2O43639 380 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.197e-13■■■■□ 22.5
GPC3-201ENST00000370818 LRRN2O75325 713 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 GFPT2O94808 682 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 KRT13P13646 458 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 SOX5P35711 763 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 STAT1P42224 750 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 SMTNP53814 917 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 DRAP1Q14919 205 aaPredicted RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 NFRKBQ6P4R8 1299 aa13.87□□□□□ -0.19
GPC3-201ENST00000370818 ALKBH5Q6P6C2 394 aaKnown RBP13.87□□□□□ -0.19
GPC3-201ENST00000370818 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms