RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 AGR3Q8TD06 166 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ULK4Q96C45 1275 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 VPS39Q96JC1 886 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 AGO2Q9UKV8 859 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PPP1R9AQ9ULJ8 1098 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 STRIP2Q9ULQ0 834 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 CDK12Q9NYV4 1490 aaPredicted RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 CCDC78A2IDD5 438 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 STMN1P16949 149 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 HSPA6P17066 643 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 INTS2Q9H0H0 1204 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 FAN1Q9Y2M0 1017 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 SULT1E1P49888 294 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 BHMTQ93088 406 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 CA4P22748 312 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 RGS7P49802 495 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 STAT5BP51692 787 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 HUNKP57058 714 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 TDRD7Q8NHU6 1098 aaKnown RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 PACSIN2Q9UNF0 486 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 A0A0G2JND7 137 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ACOT2P49753 483 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 PTK2BQ14289 1009 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 VSTM4Q8IW00 320 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 OR6P1Q8NGX9 317 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 CYTH2Q99418 400 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 BARHL2Q9NY43 387 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 SNX24Q9Y343 169 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 NNTQ13423 1086 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ATG16L1Q676U5 607 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 CCNYL1Q8N7R7 359 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 HPS3Q969F9 1004 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ZBTB18Q99592 522 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 NCK2O43639 380 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 PRKCBP05771 671 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 GPC5P78333 572 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 BAATQ14032 418 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ZC3H18Q86VM9 953 aaKnown RBP9.1□□□□□ -0.95
ABCA4-201ENST00000370225 LZICQ8WZA0 190 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 GOLPH3LQ9H4A5 285 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 KIAA1586Q9HCI6 787 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 CASS4Q9NQ75 786 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
ABCA4-201ENST00000370225 ATP9BO43861 1147 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 CALB1P05937 261 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 TMPRSS15P98073 1019 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF235Q14590 738 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 ENOX1Q8TC92 643 aaKnown RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 TMEM39BQ9GZU3 492 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 CRB1P82279 1406 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 CCL15-CCL14A0A0B4J2E2 113 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 FAM95CA0A1B0GW59 222 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GGPS1O95749 300 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 CCL15Q16663 113 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 USP33Q8TEY7 942 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 SLC13A1Q9BZW2 595 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 SMYD3Q9H7B4 428 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 EMSYQ7Z589 1322 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 COPEO14579 308 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 ZRANB2O95218 330 aaKnown RBP eCLIP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GMPSP49915 693 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 PRAMEP78395 509 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GAS2L3Q86XJ1 694 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF280CQ8ND82 737 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 TRAIPQ9BWF2 469 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 OR1G1P47890 313 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 FOXO4P98177 505 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 COG2Q14746 738 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 TTC8Q8TAM2 541 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 OTULINQ96BN8 352 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 NR1H4Q96RI1 486 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 ARID5BQ14865 1188 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 EZH2Q15910 746 aaKnown RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GSPT2Q8IYD1 628 aaKnown RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 PCDHA10Q9Y5I2 948 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 FTLP02792 175 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-201ENST00000370225 GPS1Q13098 491 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 TTC23LQ6PF05 361 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 APPL2Q8NEU8 664 aa9.09□□□□□ -0.95
ABCA4-201ENST00000370225 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms