RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 BMP6P22004 513 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 GPC3P51654 580 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 DUOXA2Q1HG44 320 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 PRAMEF18Q5VWM3 479 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF720Q7Z2F6 126 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 GLYCTKQ8IVS8 523 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 THNSL1Q8IYQ7 743 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 MTMR14Q8NCE2 650 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 SCFD2Q8WU76 684 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 RSAD2Q8WXG1 361 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 DUSP9Q99956 384 aaKnown RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 NCAPGQ9BPX3 1015 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 DPH5Q9H2P9 285 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 EFCC1Q9HA90 598 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 KCNK9Q9NPC2 374 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 TOPORSQ9NS56 1045 aaPredicted RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 SAMD15Q9P1V8 674 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 TXNDC16Q9P2K2 825 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 NXF1Q9UBU9 619 aaKnown RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 CNOT8Q9UFF9 292 aaKnown RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ARHGEF37A1IGU5 675 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 PODXLO00592 558 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 DAPK3O43293 454 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 PPFIA4O75335 1185 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ECEL1O95672 775 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 FTLP02792 175 aaPredicted RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP1A1P05023 1023 aaKnown RBP5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC9A1P19634 815 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 LIG3P49916 1009 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ACTR2P61160 394 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 KRT81Q14533 505 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 CASP8Q14790 479 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 IL17AQ16552 155 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 SGO2Q562F6 1265 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 IER5Q5VY09 327 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 NAA35Q5VZE5 725 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 CEP57Q86XR8 500 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM59Q8IWR1 403 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF507Q8TCN5 953 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 HAS1Q92839 578 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 RPS6KC1Q96S38 1066 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC38A10Q9HBR0 1119 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM8AQ9HCN3 771 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ADAM22Q9P0K1 906 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 STRIP2Q9ULQ0 834 aa5.71□□□□□ -1.5
SMNDC1-202ENST00000369603 ITGB4P16144 1822 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ANKRD65E5RJM6 399 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CXCL11O14625 94 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RGS16O15492 202 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 KLRC4O43908 158 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 EVI5O60447 810 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RTN2O75298 545 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 OATP04181 439 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CETPP11597 493 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ERVK-24P63145 666 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PGM5Q15124 567 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF699Q32M78 642 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PLA2G4FQ68DD2 849 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CATSPER4Q7RTX7 472 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ADAT2Q7Z6V5 191 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RHPN2Q8IUC4 686 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PPP1R14CQ8TAE6 165 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 WDR18Q9BV38 432 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 IRX2Q9BZI1 471 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 MROH8Q9H579 483 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ABCB6Q9NP58 842 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 TBX20Q9UMR3 447 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SCAF8Q9UPN6 1271 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF148Q9UQR1 794 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PPME1Q9Y570 386 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 COL16A1Q07092 1604 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 STRCQ7RTU9 1775 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PLCH1Q4KWH8 1693 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 FRMPD4Q14CM0 1322 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SRGAP2O75044 1071 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SLITRK3O94933 977 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 FGGP02679 453 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CNGA1P29973 690 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PMS1P54277 932 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 DR1Q01658 176 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SLMAPQ14BN4 828 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 HYIQ5T013 277 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 LGSNQ5TDP6 509 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC121Q6ZUS5 278 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PDZD4Q76G19 769 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ERICH1Q86X53 443 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RNF34Q969K3 372 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PARK7Q99497 189 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 NUDT12Q9BQG2 462 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PLCD4Q9BRC7 762 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 WNT8AQ9H1J5 351 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PLEKHA4Q9H4M7 779 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SLITRK6Q9H5Y7 841 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CYP26B1Q9NR63 512 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RSPH10B2B2RC85 870 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms