RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 LMNB1P20700 586 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 CHKAP35790 457 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 BNIP1Q12981 228 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 ELMO3Q96BJ8 720 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 CDC42EP4Q9H3Q1 356 aaKnown RBP13.23□□□□□ -0.29
PHGDH-201ENST00000369407 ETAA1Q9NY74 926 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 TTC7AQ9ULT0 858 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-201ENST00000369407 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 TGFB1I1O43294 461 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 FTLP02792 175 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 COMTP21964 271 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 NPEPPSP55786 919 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 VSTM1Q6UX27 236 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 P2RX7Q99572 595 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 ETNK1Q9HBU6 452 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 SPATA31C1P0DKV0 1188 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 TAF11Q15544 211 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 KYNUQ16719 465 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 GALNTL6Q49A17 601 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 TAOK1Q7L7X3 1001 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 SH3GL3Q99963 347 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 FAM118BQ9BPY3 351 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 H0Y3Z8 333 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 PDXKO00764 312 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 SMNDC1O75940 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 CCND1P24385 295 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 GRIK3Q13003 919 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 GNPTABQ3T906 1256 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 HYIQ5T013 277 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 SAAL1Q96ER3 474 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 HOMER3Q9NSC5 361 aa13.22□□□□□ -0.29
PHGDH-201ENST00000369407 TYW1Q9NV66 732 aaKnown RBP13.22□□□□□ -0.29
PHGDH-201ENST00000369407 STRCP1A6NGW2 1772 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 KLHL33A6NCF5 533 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 TBCAO75347 108 aaKnown RBP13.21□□□□□ -0.29
PHGDH-201ENST00000369407 PDHA1P08559 390 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 ATP2A2P16615 1042 aaKnown RBP13.21□□□□□ -0.29
PHGDH-201ENST00000369407 PPP4CP60510 307 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 GSTO1P78417 241 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 CGB2Q6NT52 195 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 EPM2AIP1Q7L775 607 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-201ENST00000369407 PHLDB2Q86SQ0 1253 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 ATG4AQ8WYN0 398 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 NCANO14594 1321 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-201ENST00000369407 PHLPP1O60346 1717 aa13.21□□□□□ -0.29
PHGDH-201ENST00000369407 CHMP2AO43633 222 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 ALADP13716 330 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 BRAFP15056 766 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 RPL13P26373 211 aaKnown RBP13.21□□□□□ -0.3
PHGDH-201ENST00000369407 FMO5P49326 533 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 ZNF543Q08ER8 600 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.3
PHGDH-201ENST00000369407 TBC1D16Q8TBP0 767 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 SPOCK2Q92563 424 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 STK33Q9BYT3 514 aa13.21□□□□□ -0.3
PHGDH-201ENST00000369407 INTS2Q9H0H0 1204 aaKnown RBP13.21□□□□□ -0.3
PHGDH-201ENST00000369407 CHRNA3P32297 505 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 LACTBP83111 547 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ATP11AP98196 1134 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 UTP4Q969X6 686 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 CCDC134Q9H6E4 229 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ARHGEF3Q9NR81 526 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 CNOT7Q9UIV1 285 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 CETPP11597 493 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 RARGP13631 454 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 TARSP26639 723 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 STX2P32856 288 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 USH1GQ495M9 461 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
PHGDH-201ENST00000369407 ECHDC2Q86YB7 292 aa13.2□□□□□ -0.3
PHGDH-201ENST00000369407 KAT5Q92993 513 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms