RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PMS2P54278 862 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 KCNJ2P63252 427 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
CHD1L-202ENST00000369258 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.186e-8■□□□□ 11.2
CHD1L-202ENST00000369258 CENPTQ96BT3 561 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 CRAMP1Q96RY5 1269 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 ERP44Q9BS26 406 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 ZDHHC18Q9NUE0 388 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 MYO3BQ8WXR4 1341 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 O00370 1275 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 EXOC3O60645 756 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 RPA1P27694 616 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 GJC1P36383 396 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 SOX10P56693 466 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 PTENP60484 403 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
CHD1L-202ENST00000369258 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 DHX38Q92620 1227 aaKnown RBP13.91□□□□□ -0.18
CHD1L-202ENST00000369258 CCDC127Q96BQ5 260 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
CHD1L-202ENST00000369258 NAP1L4Q99733 375 aaKnown RBP13.91□□□□□ -0.18
CHD1L-202ENST00000369258 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 GPRC5CQ9NQ84 441 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 PNMA3Q9UL41 463 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 NENFQ9UMX5 172 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 STK38LQ9Y2H1 464 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 CEP83Q9Y592 693 aa13.91□□□□□ -0.18
CHD1L-202ENST00000369258 PDXKO00764 312 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 RGS16O15492 202 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 SLITRK3O94933 977 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 SGPL1O95470 568 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 NOVP48745 357 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 DGKZQ13574 1117 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 PPP2R5EQ16537 467 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 MAGEC3Q8TD91 643 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 RFFLQ8WZ73 363 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 PABPC3Q9H361 631 aaKnown RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 COMTP21964 271 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 PPP3CAQ08209 521 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 DUPD1Q68J44 220 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 CCDC105Q8IYK2 499 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 TXLNGYQ9BZA5 131 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 INTS2Q9H0H0 1204 aaKnown RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 FGFR1OP2Q9NVK5 253 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 SAMD15Q9P1V8 674 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-202ENST00000369258 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 MYH11P35749 1972 aa13.9□□□□□ -0.18
CHD1L-202ENST00000369258 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 NDUFB10O96000 172 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 GH2P01242 217 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 MYBL1P10243 752 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 LMNB1P20700 586 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 ICA1Q05084 483 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 FAM178BQ8IXR5 827 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 CCDC63Q8NA47 563 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 HEMGNQ9BXL5 484 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 TOPORSQ9NS56 1045 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 INTS9Q9NV88 658 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 GAKO14976 1311 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 CLDN3O15551 220 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 CYP26A1O43174 497 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 MGRN1O60291 552 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 ARP10275 920 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 CHKAP35790 457 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 SPDYCQ5MJ68 293 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 CCDC137Q6PK04 289 aaKnown RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 BARGINQ6ZT62 677 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 TAB3Q8N5C8 712 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-202ENST00000369258 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 KCNK9Q9NPC2 374 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 FBXO28Q9NVF7 368 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 GRHL1Q9NZI5 618 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
CHD1L-202ENST00000369258 DIS3Q9Y2L1 958 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms