RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 PFKMP08237 780 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 MYBP10242 640 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 CYP2C18P33260 490 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 STX1AQ16623 288 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 ZPBP2Q6X784 338 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 MAP4K3Q8IVH8 894 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 KIAA0895Q8NCT3 520 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 HPS3Q969F9 1004 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 DHTKD1Q96HY7 919 aaPredicted RBP27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 CHST12Q9NRB3 414 aa27.59■■■□□ 2.01
NSMCE4A-201ENST00000369017 KNOP1Q1ED39 458 aaKnown RBP27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 ZSCAN23Q3MJ62 389 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 ZC2HC1CQ53FD0 456 aaPredicted RBP27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 ISM2Q6H9L7 571 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 MFSD5Q6N075 450 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 TRAF7Q6Q0C0 670 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 HS2ST1Q7LGA3 356 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 SEPT8Q92599 483 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 FTHL17Q9BXU8 183 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 NAT10Q9H0A0 1025 aaKnown RBP27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 GDAQ9Y2T3 454 aa27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 NOC2LQ9Y3T9 749 aaKnown RBP27.58■■■□□ 2.01
NSMCE4A-201ENST00000369017 TRIM43BA6NCK2 446 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 HNRNPDLO14979 420 aaKnown RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 GHRP10912 638 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 ZSCAN20P17040 1043 aaPredicted RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 LIG4P49917 911 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 CCL23P55773 120 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 NFX1Q12986 1120 aaKnown RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 LPIN1Q14693 890 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 SLFN12LQ6IEE8 588 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 NOTUMQ6P988 496 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 SCFD1Q8WVM8 642 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 TMEM40Q8WWA1 233 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 TRIM43Q96BQ3 446 aaPredicted RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 CCDC51Q96ER9 411 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 ADPGKQ9BRR6 497 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 IFIH1Q9BYX4 1025 aaKnown RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 GBP3Q9H0R5 595 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 MINDY3Q9H8M7 445 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 RNF216Q9NWF9 866 aaPredicted RBP27.57■■■□□ 2
NSMCE4A-201ENST00000369017 CNTNAP2Q9UHC6 1331 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 TANC1Q9C0D5 1861 aa27.57■■■□□ 2
NSMCE4A-201ENST00000369017 BICDL2A1A5D9 508 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 N4BP3O15049 544 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 PRPF6O94906 941 aaKnown RBP27.56■■■□□ 2
NSMCE4A-201ENST00000369017 PIGRP01833 764 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 CASP5P51878 434 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 TSG101Q99816 390 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 LBHD1Q9BQE6 289 aaPredicted RBP27.56■■■□□ 2
NSMCE4A-201ENST00000369017 AGPAT5Q9NUQ2 364 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 PADI3Q9ULW8 664 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 ST3GAL5Q9UNP4 418 aa27.56■■■□□ 2
NSMCE4A-201ENST00000369017 SYCE3A1L190 88 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 CALUO43852 315 aaPredicted RBP27.55■■■□□ 2
NSMCE4A-201ENST00000369017 CAVIN2O95810 425 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 PRCPP42785 496 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 PPIGQ13427 754 aaKnown RBP eCLIP27.55■■■□□ 28e-8■■□□□ 13.7
NSMCE4A-201ENST00000369017 ATF7IP2Q5U623 682 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 FAM228AQ86W67 206 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 ADSSL1Q8N142 457 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 WNT8AQ9H1J5 351 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 SIP14410 1827 aa27.55■■■□□ 2
NSMCE4A-201ENST00000369017 PDXKO00764 312 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 KIAA0391O15091 583 aaKnown RBP27.54■■■□□ 2
NSMCE4A-201ENST00000369017 TSPAN1O60635 241 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 TOM1L1O75674 476 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 CXCL10P02778 98 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 UMODL1Q5DID0 1318 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 ALPK3Q96L96 1907 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 TCHPQ9BT92 498 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 ERVK-5Q9HDB9 667 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 TYW1Q9NV66 732 aaKnown RBP27.54■■■□□ 2
NSMCE4A-201ENST00000369017 MAPK8IP1Q9UQF2 711 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 PIN4Q9Y237 131 aaKnown RBP27.54■■■□□ 2
NSMCE4A-201ENST00000369017 TNFSF13BQ9Y275 285 aa27.54■■■□□ 2
NSMCE4A-201ENST00000369017 CSDE1O75534 798 aaKnown RBP27.53■■■□□ 2
NSMCE4A-201ENST00000369017 SKIP12755 728 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 CD52P31358 61 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 TYRO3Q06418 890 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 KYAT1Q16773 422 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 PLEKHG4Q58EX7 1191 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 TAS1R3Q7RTX0 852 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 NELFCDQ8IXH7 590 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 SCLYQ96I15 445 aa27.53■■■□□ 2
NSMCE4A-201ENST00000369017 ACO2Q99798 780 aaKnown RBP27.53■■■□□ 2
NSMCE4A-201ENST00000369017 A0A1B0GUA9 196 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 CLDN3O15551 220 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 NBNO60934 754 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 EFCAB14O75071 495 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 ACTN1P12814 892 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 ARF4P18085 180 aaPredicted RBP27.52■■■□□ 2
NSMCE4A-201ENST00000369017 RPL13P26373 211 aaKnown RBP27.52■■■□□ 2
NSMCE4A-201ENST00000369017 ERCC5P28715 1186 aaPredicted RBP27.52■■■□□ 2
NSMCE4A-201ENST00000369017 MATR3P43243 847 aaKnown RBP eCLIP27.52■■■□□ 2
NSMCE4A-201ENST00000369017 LRRC63Q05C16 580 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 AMHR2Q16671 573 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 SLC27A1Q6PCB7 646 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 FOXR2Q6PJQ5 311 aa27.52■■■□□ 2
NSMCE4A-201ENST00000369017 SMYD4Q8IYR2 804 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms