RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SPP2Q13103 211 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 VPS39Q96JC1 886 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 FAM81BQ96LP2 452 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 MAFGO15525 162 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
SNX27-202ENST00000368841 NLRP11P59045 1033 aaKnown RBP19.31■□□□□ 0.68
SNX27-202ENST00000368841 NRBF2Q96F24 287 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 MYCBPQ99417 103 aaPredicted RBP19.31■□□□□ 0.68
SNX27-202ENST00000368841 EFTUD2Q15029 972 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNX27-202ENST00000368841 FAM118BQ9BPY3 351 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 COA1Q9GZY4 146 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 SULT1E1P49888 294 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 GPC5P78333 572 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 FEM1BQ9UK73 627 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 ZFYVE16Q7Z3T8 1539 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 GNAT1P11488 350 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 RGS7P49802 495 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 PMS2P54278 862 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 LRRC63Q05C16 580 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 ECT2Q9H8V3 914 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 ELP3Q9H9T3 547 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 FBXO38Q6PIJ6 1188 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 FTLP02792 175 aaPredicted RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 PYGLP06737 847 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 FCER1AP12319 257 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 ALDH18A1P54886 795 aaKnown RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 HEATR6Q6AI08 1181 aaKnown RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 ARHGEF1Q92888 912 aaKnown RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 LXNQ9BS40 222 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 PANX2Q96RD6 677 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 CTIFO43310 598 aaKnown RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 LDHAP00338 332 aaKnown RBP19.3■□□□□ 0.68
SNX27-202ENST00000368841 MTM1Q13496 603 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 CAPN10Q9HC96 672 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
SNX27-202ENST00000368841 SAMD9Q5K651 1589 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 ARHGEF37A1IGU5 675 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 PJA2O43164 708 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 TDP2O95551 362 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 DRAP1Q14919 205 aaPredicted RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 NAF1Q96HR8 494 aaKnown RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 FAM161BQ96MY7 647 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 UGGT1Q9NYU2 1555 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 FOXN1O15353 648 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 PRAMEP78395 509 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 UNC45AQ9H3U1 944 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 RPAP3Q9H6T3 665 aaPredicted RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 IFNAR1P17181 557 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 PRAMEF18Q5VWM3 479 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 SLC30A5Q8TAD4 765 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 HSPA8P11142 646 aaKnown RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 TOB2Q14106 344 aaPredicted RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 EPHA10Q5JZY3 1008 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 UNC13DQ70J99 1090 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 YAF2Q8IY57 180 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 PCSK7Q16549 785 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 BZW1Q7L1Q6 419 aaKnown RBP19.29■□□□□ 0.68
SNX27-202ENST00000368841 ADCK2Q7Z695 626 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 MS4A14Q96JA4 679 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 CLMNQ96JQ2 1002 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 MXD3Q9BW11 206 aa19.29■□□□□ 0.68
SNX27-202ENST00000368841 hCG_1984214I3L0E3 225 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 ZRANB2O95218 330 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNX27-202ENST00000368841 KCNA2P16389 499 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 NNMTP40261 264 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 PMS1P54277 932 aaKnown RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 TNFAIP2Q03169 654 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 NCAPHQ15003 741 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 C11orf96Q7Z7L8 435 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 ZNF713Q8N859 430 aaPredicted RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 TGS1Q96RS0 853 aaKnown RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 CEP72Q9P209 647 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 MEFVO15553 781 aaPredicted RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 CDC27P30260 824 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 DDX47Q9H0S4 455 aaKnown RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 PPP3CCP48454 512 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 NUP93Q8N1F7 819 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 PGBD3Q8N328 593 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 AURKCQ9UQB9 309 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 KRT37O76014 449 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 ST13P4Q8IZP2 240 aaPredicted RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 CCDC157Q569K6 752 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 BTN2A2Q8WVV5 523 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 SENP1Q9P0U3 644 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 MINPP1Q9UNW1 487 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 KRT14P02533 472 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 KIZQ2M2Z5 673 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 CELF1Q92879 486 aaKnown RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 BHMTQ93088 406 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 CENPKQ9BS16 269 aa19.28■□□□□ 0.68
SNX27-202ENST00000368841 PIN4Q9Y237 131 aaKnown RBP19.28■□□□□ 0.68
SNX27-202ENST00000368841 SPDYAQ5MJ70 313 aa19.27■□□□□ 0.68
SNX27-202ENST00000368841 CPA5Q8WXQ8 436 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms