RNA–Protein interactions for RNA: ENST00000368409.7

EFNA4-202, Transcript of ephrin A4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFNA4, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-202ENST00000368409 SRGAP1Q7Z6B7 1085 aa18.36■□□□□ 0.53
EFNA4-202ENST00000368409 MRPL10Q7Z7H8 261 aaKnown RBP18.36■□□□□ 0.53
EFNA4-202ENST00000368409 TMEM143Q96AN5 459 aa18.36■□□□□ 0.53
EFNA4-202ENST00000368409 PGBD4Q96DM1 585 aa18.36■□□□□ 0.53
EFNA4-202ENST00000368409 CNTNAP2Q9UHC6 1331 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 EPCAMP16422 314 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 YWHABP31946 246 aaKnown RBP18.35■□□□□ 0.53
EFNA4-202ENST00000368409 CA8P35219 290 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 MTHFRP42898 656 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 ZNF280BQ86YH2 543 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 URGCPQ8TCY9 931 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 SLC22A17Q8WUG5 538 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 TNFRSF25Q93038 417 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 PRRX2Q99811 253 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 GBP3Q9H0R5 595 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 RGL1Q9NZL6 768 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
EFNA4-202ENST00000368409 FRYLO94915 3013 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 FAM205CA6NFA0 338 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 C2CD4DB7Z1M9 353 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 DTNBO60941 627 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 SRGAP2CP0DJJ0 459 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 PTPN5P54829 565 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 RARS2Q5T160 578 aaKnown RBP18.34■□□□□ 0.53
EFNA4-202ENST00000368409 NCAPH2Q6IBW4 605 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 SLFN12Q8IYM2 578 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 DYDC2Q96IM9 177 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 RSAD1Q9HA92 442 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
EFNA4-202ENST00000368409 STK39Q9UEW8 545 aa18.34■□□□□ 0.53
EFNA4-202ENST00000368409 ASAP2O43150 1006 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 DDHD2O94830 711 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 WEE2P0C1S8 567 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 AFF1P51825 1210 aaKnown RBP18.33■□□□□ 0.52
EFNA4-202ENST00000368409 VCPP55072 806 aaKnown RBP18.33■□□□□ 0.52
EFNA4-202ENST00000368409 ANAPC15P60006 121 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 TCF15Q12870 199 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 NR5A1Q13285 461 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 OTUD6AQ7L8S5 288 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 ZBTB33Q86T24 672 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 C12orf76Q8N812 135 aaPredicted RBP18.33■□□□□ 0.52
EFNA4-202ENST00000368409 KREMEN2Q8NCW0 462 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 WASF1Q92558 559 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.52
EFNA4-202ENST00000368409 ZNF292O60281 2723 aa18.33■□□□□ 0.52
EFNA4-202ENST00000368409 ZBTB39O15060 712 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 MARCH6O60337 910 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
EFNA4-202ENST00000368409 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
EFNA4-202ENST00000368409 AK2P54819 239 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 CYP4A11Q02928 519 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 MTMR3Q13615 1198 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
EFNA4-202ENST00000368409 PCBP1Q15365 356 aaKnown RBP eCLIP18.32■□□□□ 0.52
EFNA4-202ENST00000368409 XKR9Q5GH70 373 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 PPFIBP1Q86W92 1011 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 UBALD2Q8IYN6 164 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 RNF149Q8NC42 400 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 TMEM175Q9BSA9 504 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 XPNPEP1Q9NQW7 623 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 SORCS3Q9UPU3 1222 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 FAM186AA6NE01 2351 aa18.32■□□□□ 0.52
EFNA4-202ENST00000368409 INPPL1O15357 1258 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 TSPAN1O60635 241 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 ERLIN2O94905 339 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 SLITRK3O94933 977 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 LYPLA2O95372 231 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 KRT2P35908 639 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 MXD4Q14582 209 aaPredicted RBP18.31■□□□□ 0.52
EFNA4-202ENST00000368409 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 KANK3Q6NY19 840 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
EFNA4-202ENST00000368409 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 TDRD5Q8NAT2 981 aaKnown RBP18.31■□□□□ 0.52
EFNA4-202ENST00000368409 SMG8Q8ND04 991 aaKnown RBP18.31■□□□□ 0.52
EFNA4-202ENST00000368409 CCDC51Q96ER9 411 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 PHOX2BQ99453 314 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 MTRQ99707 1265 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 SFXN1Q9H9B4 322 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
EFNA4-202ENST00000368409 LILRB3O75022 631 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
EFNA4-202ENST00000368409 BRD1O95696 1058 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 PDGFBP01127 241 aaPredicted RBP18.3■□□□□ 0.52
EFNA4-202ENST00000368409 POMCP01189 267 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 AXLP30530 894 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 CLCN4P51793 760 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 PTENP60484 403 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 ATAT1Q5SQI0 421 aa18.3■□□□□ 0.52
EFNA4-202ENST00000368409 CABP7Q86V35 215 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms