RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 FBXO16Q8IX29 292 aaPredicted RBP8.93□□□□□ -0.98
SSR2-202ENST00000368311 C4orf19Q8IY42 314 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 TBC1D19Q8N5T2 526 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 TBC1D31Q96DN5 1066 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 HEXIM2Q96MH2 286 aaKnown RBP8.93□□□□□ -0.98
SSR2-202ENST00000368311 AGBL1Q96MI9 1066 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 PLIN2Q99541 437 aa8.93□□□□□ -0.98
SSR2-202ENST00000368311 RHOBTB3O94955 611 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 NDUFV1P49821 464 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 CAMK4Q16566 473 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 REPS2Q8NFH8 660 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 OTUD7AQ8TE49 926 aaPredicted RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 AFG1LQ8WV93 481 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 TYW1Q9NV66 732 aaKnown RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 ANAPC5Q9UJX4 755 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 AGO2Q9UKV8 859 aaKnown RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 CNTNAP1P78357 1384 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 UQCRHLA0A096LP55 91 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 SMIM35A0A1B0GVV1 85 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 MAP3K13O43283 966 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 RHBDL3P58872 404 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 RTP1P59025 263 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ZNF445P59923 1031 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ITGA7Q13683 1181 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PGM5Q15124 567 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PPP1R21Q6ZMI0 780 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ZNF589Q86UQ0 364 aaPredicted RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 SCN4BQ8IWT1 228 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 BBOF1Q8ND07 529 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 EMILIN3Q9NT22 766 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ZNF536O15090 1300 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 THP07101 528 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 CASQ1P31415 396 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ADCYAP1R1P41586 468 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 CRYBB1P53674 252 aaPredicted RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 CDK17Q00537 523 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PLCB3Q01970 1234 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 NAALADL2Q58DX5 795 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 TRMT11Q7Z4G4 463 aaKnown RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 ZNF592Q92610 1267 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 CYP26B1Q9NR63 512 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 TRPM5Q9NZQ8 1165 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PAPPAQ13219 1627 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 PIK3CDO00329 1044 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 P4HA2O15460 535 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 TUBBP07437 444 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 CYP3A4P08684 503 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 ABCB4P21439 1286 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 DDIT3P35638 169 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 DEFB128Q7Z7B8 93 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 TMEM86AQ8N2M4 240 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 RYBPQ8N488 228 aaPredicted RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 BANK1Q8NDB2 785 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 KCNH7Q9NS40 1196 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 MTRF1LQ9UGC7 380 aaKnown RBP8.92□□□□□ -0.98
SSR2-202ENST00000368311 ZNF112Q9UJU3 913 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 NCKAP1Q9Y2A7 1128 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
SSR2-202ENST00000368311 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.91□□□□□ -0.98
SSR2-202ENST00000368311 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.91□□□□□ -0.98
SSR2-202ENST00000368311 ATAT1Q5SQI0 421 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 USP17L6PQ6QN14 398 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 LBX2Q6XYB7 198 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 NELFCDQ8IXH7 590 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 CASP10Q92851 521 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 CCDC68Q9H2F9 335 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 BCCIPQ9P287 314 aaKnown RBP eCLIP8.91□□□□□ -0.98
SSR2-202ENST00000368311 WDR35Q9P2L0 1181 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 SF3B1O75533 1304 aaKnown RBP eCLIP8.91□□□□□ -0.983e-6■■■■■ 38.8
SSR2-202ENST00000368311 GIPC1O14908 333 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 LGR5O75473 907 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 ALDH3A1P30838 453 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 MAP7Q14244 749 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 SGSM1Q2NKQ1 1148 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 ZNF658Q5TYW1 1059 aaPredicted RBP8.91□□□□□ -0.98
SSR2-202ENST00000368311 TTBK2Q6IQ55 1244 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 ANKS3Q6ZW76 656 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 NPAS4Q8IUM7 802 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 PGBD3Q8N328 593 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 PIK3R5Q8WYR1 880 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 VPS50Q96JG6 964 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 BHMT2Q9H2M3 363 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 TJP2Q9UDY2 1190 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 PKD1L3Q7Z443 1732 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 MARF1Q9Y4F3 1742 aaKnown RBP8.91□□□□□ -0.98
SSR2-202ENST00000368311 BTBD18B2RXH4 712 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 ARVCFO00192 962 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 ASGR1P07306 291 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 GRIK1P39086 918 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 CYP26C1Q6V0L0 522 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 NSUN7Q8NE18 718 aaKnown RBP8.91□□□□□ -0.98
SSR2-202ENST00000368311 CCHCR1Q8TD31 782 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 THAP9Q9H5L6 903 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 SPG21Q9NZD8 308 aa8.91□□□□□ -0.98
SSR2-202ENST00000368311 GIT1Q9Y2X7 761 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms