RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SNX24Q9Y343 169 aa14.17□□□□□ -0.14
PTPRK-204ENST00000368210 TADA3O75528 432 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-204ENST00000368210 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 ZNF302Q9NR11 478 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 hCG_2014768A0A024R1R8 64 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 FTLP02792 175 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-204ENST00000368210 RFX1P22670 979 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 KIF22Q14807 665 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-204ENST00000368210 MTRQ99707 1265 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 PALMDQ9NP74 551 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 MAD2L2Q9UI95 211 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 MGEA5O60502 916 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 CAND2O75155 1236 aa14.16□□□□□ -0.14
PTPRK-204ENST00000368210 DARS2Q6PI48 645 aaKnown RBP14.16□□□□□ -0.14
PTPRK-204ENST00000368210 RPAP3Q9H6T3 665 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-204ENST00000368210 ARHGAP42A6NI28 874 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 ARL4AP40617 200 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 PDE1BQ01064 536 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 ARHGEF18Q6ZSZ5 1173 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 REEP2Q9BRK0 252 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 LRRC4Q9HBW1 653 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 TBK1Q9UHD2 729 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 MRPS35P82673 323 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 SPOUT1Q5T280 376 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 EP400NLQ6ZTU2 488 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 TMED2Q15363 201 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 C11orf70Q9BRQ4 267 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 TUBB6Q9BUF5 446 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 DDX47Q9H0S4 455 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 PACSIN2Q9UNF0 486 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 RIMS1Q86UR5 1692 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 SOX5P35711 763 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 SEC23AQ15436 765 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 RSRC2Q7L4I2 434 aaKnown RBP14.15□□□□□ -0.14
PTPRK-204ENST00000368210 LPAR1Q92633 364 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 HPSEQ9Y251 543 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 PLAAQ9Y263 795 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 TSC22D4Q9Y3Q8 395 aa14.15□□□□□ -0.14
PTPRK-204ENST00000368210 EXOC1LA0A1B0GW35 172 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 MSH2P43246 934 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 FXR2P51116 673 aaKnown RBP eCLIP14.14□□□□□ -0.155e-7■■□□□ 12
PTPRK-204ENST00000368210 HMGCS2P54868 508 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 NTRK3Q16288 839 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 PASD1Q8IV76 773 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 GSPT2Q8IYD1 628 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 SCYL3Q8IZE3 742 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 VCPKMTQ9H867 229 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 SSU72P8A0A1W2PR75 194 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ESYT3A0FGR9 886 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 PPP1R3GB7ZBB8 358 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 GYPCP04921 128 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 PSMA2P25787 234 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ITKQ08881 620 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ZNF568Q3ZCX4 644 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 DAGLBQ8NCG7 672 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ZNF564Q8TBZ8 553 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 FAM151AQ8WW52 585 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 RFFLQ8WZ73 363 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ACSL3O95573 720 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ACTN1P12814 892 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 TOB1P50616 345 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 C6orf118Q5T5N4 469 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 TXNRD3Q86VQ6 643 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 SPATA4Q8NEY3 305 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■□□□□ 8.7
PTPRK-204ENST00000368210 ZNF70Q9UC06 446 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 GRID2IPA4D2P6 1211 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 TJP3O95049 919 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 YWHABP31946 246 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 KLC1Q07866 573 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 BBS9Q3SYG4 887 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 PDIK1LQ8N165 341 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 FBXL13Q8NEE6 735 aa14.14□□□□□ -0.15
PTPRK-204ENST00000368210 NGRNQ9NPE2 291 aaKnown RBP14.14□□□□□ -0.15
PTPRK-204ENST00000368210 ARHGAP10A1A4S6 786 aa14.13□□□□□ -0.15
PTPRK-204ENST00000368210 SART1O43290 800 aaKnown RBP14.13□□□□□ -0.15
PTPRK-204ENST00000368210 SLC26A4O43511 780 aa14.13□□□□□ -0.15
PTPRK-204ENST00000368210 CPP00450 1065 aa14.13□□□□□ -0.15
PTPRK-204ENST00000368210 GGCXP38435 758 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms