RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 LRRC8CQ8TDW0 803 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 COPB2P35606 906 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 EFNA5P52803 228 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 NBPF12Q5TAG4 269 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 AFAP1L2Q8N4X5 818 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 AGPAT1Q99943 283 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SMYD2Q9NRG4 433 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 TTC7AQ9ULT0 858 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 LRRC71Q8N4P6 559 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SLC30A5Q8TAD4 765 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 APEX2Q9UBZ4 518 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 ZNF185O15231 689 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 ICAM1P05362 532 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 ARP10275 920 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 EMC2Q15006 297 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SLC18A3Q16572 532 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
PTPRK-203ENST00000368207 EVI5O60447 810 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 SLC4A1P02730 911 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 CALB1P05937 261 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 MSH2P43246 934 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 PSMD6Q15008 389 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 PDIK1LQ8N165 341 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 PPP4R1Q8TF05 950 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 EHD4Q9H223 541 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 SALL1Q9NSC2 1324 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 TJP3O95049 919 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 LIG3P49916 1009 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 CUL1Q13616 776 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 CAPN7Q9Y6W3 813 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
PTPRK-203ENST00000368207 SNAPC2Q13487 334 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 SYT2Q8N9I0 419 aaPredicted RBP13.15□□□□□ -0.3
PTPRK-203ENST00000368207 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
PTPRK-203ENST00000368207 GALCP54803 685 aa13.15□□□□□ -0.31
PTPRK-203ENST00000368207 TMEM62Q0P6H9 643 aa13.15□□□□□ -0.31
PTPRK-203ENST00000368207 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.31
PTPRK-203ENST00000368207 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.31
PTPRK-203ENST00000368207 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.31
PTPRK-203ENST00000368207 SH3BP5O60239 455 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 RFX1P22670 979 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 CCDC68Q9H2F9 335 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 NFIBO00712 420 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 GLE1Q53GS7 698 aaKnown RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 PYROXD1Q8WU10 500 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 TIPINQ9BVW5 301 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 A8MXQ7 604 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 PODXLO00592 558 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 NR1D1P20393 614 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 CYP2B6P20813 491 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ADORA2BP29275 332 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 IL9RQ01113 521 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 IFT88Q13099 833 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ALS2CLQ60I27 953 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 NXNQ6DKJ4 435 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms