RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 FLT3P36888 993 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 PTGER2P43116 358 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 PRPF4BQ13523 1007 aaKnown RBP15.43■□□□□ 0.06
CD48-201ENST00000368045 DLGAP5Q15398 846 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
CD48-201ENST00000368045 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 CROCCP2Q86T23 111 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 HOOK3Q86VS8 718 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 MICALL1Q8N3F8 863 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 OTUD6BQ8N6M0 293 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 CELF4Q9BZC1 486 aaKnown RBP15.43■□□□□ 0.06
CD48-201ENST00000368045 FAM129AQ9BZQ8 928 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 DPH5Q9H2P9 285 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 RABEP2Q9H5N1 569 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 ZDHHC18Q9NUE0 388 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 CTTNBP2NLQ9P2B4 639 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 PARP2Q9UGN5 583 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 ALG6Q9Y672 507 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 ZNF536O15090 1300 aa15.43■□□□□ 0.06
CD48-201ENST00000368045 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 FTLP02792 175 aaPredicted RBP15.42■□□□□ 0.06
CD48-201ENST00000368045 NUDT17P0C025 328 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
CD48-201ENST00000368045 QARSP47897 775 aaKnown RBP15.42■□□□□ 0.06
CD48-201ENST00000368045 GTF2BQ00403 316 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 PPP3CAQ08209 521 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 DRP2Q13474 957 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 OR2W6PQ8NHA6 318 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 HVCN1Q96D96 273 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 ZSWIM1Q9BR11 485 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 TRIM51Q9BSJ1 452 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 WNT8AQ9H1J5 351 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 CENPHQ9H3R5 247 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 KCNH7Q9NS40 1196 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 MAP3K20Q9NYL2 800 aaKnown RBP15.42■□□□□ 0.06
CD48-201ENST00000368045 HSPBP1Q9NZL4 362 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 UBIAD1Q9Y5Z9 338 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 CNTNAP1P78357 1384 aa15.42■□□□□ 0.06
CD48-201ENST00000368045 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 PODXLO00592 558 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 DHX15O43143 795 aaKnown RBP15.41■□□□□ 0.06
CD48-201ENST00000368045 LRRN2O75325 713 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 FSBPO95073 299 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 RARRES1P49788 294 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 MXI1P50539 228 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 IFFO1Q0D2I5 559 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 KRT71Q3SY84 523 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 PALB2Q86YC2 1186 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 JAMLQ86YT9 394 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 ARHGEF19Q8IW93 802 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 FAM71AQ8IYT1 594 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
CD48-201ENST00000368045 RDH13Q8NBN7 331 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 SLC20A1Q8WUM9 679 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 ALG3Q92685 438 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 TLCD1Q96CP7 247 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 AGO4Q9HCK5 861 aaKnown RBP15.41■□□□□ 0.06
CD48-201ENST00000368045 TBC1D22BQ9NU19 505 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
CD48-201ENST00000368045 CCPG1Q9ULG6 757 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 EXOC7Q9UPT5 735 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 ZHX2Q9Y6X8 837 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 E7EVH7 732 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 TRAPPC3O43617 180 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 CTNNA2P26232 953 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 CAP2P40123 477 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 LIG3P49916 1009 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 DLG4P78352 724 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 TKFCQ3LXA3 575 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 SEL1L2Q5TEA6 688 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 PCNX4Q63HM2 1172 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 GMLQ99445 158 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 PSMD1Q99460 953 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 NR2E1Q9Y466 385 aa15.41■□□□□ 0.06
CD48-201ENST00000368045 CLRN2A0PK11 232 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 PTGIRP43119 386 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 MFAP3P55082 362 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 ENPEPQ07075 957 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 BYSLQ13895 437 aaKnown RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 HAUS6Q7Z4H7 955 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 FAM83AQ86UY5 434 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 PROCA1Q8NCQ7 364 aaPredicted RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 CENPTQ96BT3 561 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 CBWD1Q9BRT8 395 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 PABPC3Q9H361 631 aaKnown RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 NOCTQ9UK39 431 aaKnown RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 MTUS1Q9ULD2 1270 aa15.4■□□□□ 0.06
CD48-201ENST00000368045 NOVA2Q9UNW9 492 aaKnown RBP15.4■□□□□ 0.06
CD48-201ENST00000368045 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms