RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
USF1-202ENST00000368020 NTPCRQ9BSD7 190 aaKnown RBP15.22■□□□□ 0.03
USF1-202ENST00000368020 JPH1Q9HDC5 661 aaPredicted RBP15.22■□□□□ 0.03
USF1-202ENST00000368020 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
USF1-202ENST00000368020 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
USF1-202ENST00000368020 PFASO15067 1338 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 ZNF185O15231 689 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 EVI5O60447 810 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 DGAT1O75907 488 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 CCNE2O96020 404 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 DRAP1Q14919 205 aaPredicted RBP15.21■□□□□ 0.03
USF1-202ENST00000368020 FAM102BQ5T8I3 360 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 PBKQ96KB5 322 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 BCAS3Q9H6U6 928 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 MED4Q9NPJ6 270 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 CYP39A1Q9NYL5 469 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 RIPK3Q9Y572 518 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 A0A0G2JMZ2 1700 aa15.21■□□□□ 0.03
USF1-202ENST00000368020 PDE2AO00408 941 aaPredicted RBP15.2■□□□□ 0.02
USF1-202ENST00000368020 ATP9AO75110 1047 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 KCNA2P16389 499 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 TNFRSF8P28908 595 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 PEX3P56589 373 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
USF1-202ENST00000368020 KIF22Q14807 665 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 TMEM132BQ14DG7 1078 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 TERF2Q15554 542 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
USF1-202ENST00000368020 UGCGQ16739 394 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CBWD6Q4V339 395 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 HSP90B2PQ58FF3 399 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CBWD3Q5JTY5 395 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CBWD5Q5RIA9 395 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 MIS18BP1Q6P0N0 1132 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 KSR1Q8IVT5 923 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 SELENOOQ9BVL4 669 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 SLC9A2Q9UBY0 812 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 TBX20Q9UMR3 447 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 PDHXO00330 501 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CLSTN1O94985 981 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 GTF2H1P32780 548 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CASP8Q14790 479 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 RPS6KA1Q15418 735 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 CLUL1Q15846 466 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 MAEAQ7L5Y9 396 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 TMEM161BQ8NDZ6 487 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 KCNN1Q92952 543 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 FAM81BQ96LP2 452 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 PTPN18Q99952 460 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 KMT5AQ9NQR1 393 aa15.2■□□□□ 0.02
USF1-202ENST00000368020 NCANO14594 1321 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 IGSF9BQ9UPX0 1349 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
USF1-202ENST00000368020 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 KIAA0391O15091 583 aaKnown RBP15.19■□□□□ 0.02
USF1-202ENST00000368020 SLC16A4O15374 487 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 TRIM49P0CI25 452 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 TRIM49CP0CI26 452 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 ICAM3P32942 547 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 NOP2P46087 812 aaKnown RBP15.19■□□□□ 0.02
USF1-202ENST00000368020 C2orf54Q08AI8 447 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 SREBF2Q12772 1141 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 NOGQ13253 232 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 PLS1Q14651 629 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 STXBP2Q15833 593 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 DEFB115Q30KQ5 88 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 C8orf74Q6P047 294 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 ANO5Q75V66 913 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
USF1-202ENST00000368020 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 CEP170P1Q96L14 293 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 ATP6V0A4Q9HBG4 840 aa15.19■□□□□ 0.02
USF1-202ENST00000368020 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
USF1-202ENST00000368020 CCDC169A6NNP5 214 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 DDX3XO00571 662 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■■□□ 15.5
USF1-202ENST00000368020 TMEM253P0C7T8 217 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 OAS2P29728 719 aaKnown RBP15.18■□□□□ 0.02
USF1-202ENST00000368020 NPTX2P47972 431 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 TM4SF4P48230 202 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
USF1-202ENST00000368020 MXI1P50539 228 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 TNNC1P63316 161 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 BRDTQ58F21 947 aaPredicted RBP15.18■□□□□ 0.02
USF1-202ENST00000368020 XKR3Q5GH77 459 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 CTNNBL1Q8WYA6 563 aaPredicted RBP15.18■□□□□ 0.02
USF1-202ENST00000368020 RFFLQ8WZ73 363 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
USF1-202ENST00000368020 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
USF1-202ENST00000368020 STIM2Q9P246 746 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms