RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 IPO11Q9UI26 975 aaKnown RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 IGSF9BQ9UPX0 1349 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CCDC88AQ3V6T2 1871 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 FGGP02679 453 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 GUCY2FP51841 1108 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 PTGISQ16647 500 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 POMGNT1Q8WZA1 660 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 NFU1Q9UMS0 254 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CTNND1O60716 968 aaKnown RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 KRT37O76014 449 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 FSBPO95073 299 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 SKIP12755 728 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 POLGP54098 1239 aaPredicted RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 SKIDA1Q1XH10 827 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 LARGE2Q8N3Y3 721 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 HOXC10Q9NYD6 342 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 SIK3Q9Y2K2 1263 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 GLI3P10071 1580 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 KIF3CO14782 793 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CCND1P24385 295 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 COG7P83436 770 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 TMEM139Q8IV31 216 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 ST6GALNAC4Q9H4F1 302 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 UBE2TQ9NPD8 197 aaPredicted RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 SLC24A2Q9UI40 661 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CD2APQ9Y5K6 639 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 TLDC2A0PJX2 215 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 TRIM49BA6NDI0 452 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 TBC1D12O60347 775 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CCDC22O60826 627 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 SHOX2O60902 331 aaPredicted RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 SNHG28P0DPA3 235 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 TNNI1P19237 187 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 PTENP60484 403 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 GRM1Q13255 1194 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 PRPSAP1Q14558 356 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 DRAP1Q14919 205 aaPredicted RBP7.8□□□□□ -1.16
VTA1-202ENST00000367630 SERPINI1Q99574 410 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 NBPF3Q9H094 633 aa7.8□□□□□ -1.16
VTA1-202ENST00000367630 RARGP13631 454 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PDIK1LQ8N165 341 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 THOC1Q96FV9 657 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 PABPC3Q9H361 631 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 TMX2Q9Y320 296 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 POTECB2RU33 542 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 ENC1O14682 589 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 KRT38O76015 456 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 FAM83AQ86UY5 434 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 DYNLL2Q96FJ2 89 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 RNPC3Q96LT9 517 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 INO80BQ9C086 356 aaPredicted RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 HESX1Q9UBX0 185 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 MMEP08473 750 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 TMEM191BP0C7N4 346 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 GOLGA8HP0CJ92 632 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 OSBPP22059 807 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 DNAJB2P25686 324 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 MSH2P43246 934 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 KIF22Q14807 665 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 CHST13Q8NET6 341 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 ZNF473Q8WTR7 871 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 MXRA8Q9BRK3 442 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 TCHPQ9BT92 498 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 CPSF2Q9P2I0 782 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 STOML1Q9UBI4 398 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PCDHB2Q9Y5E7 798 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 LAMB1P07942 1786 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PRKAA2P54646 552 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 LRRC38Q5VT99 294 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 CCDC25Q86WR0 208 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 SLC5A5Q92911 643 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 VCX3AQ9NNX9 186 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PPANQ9NQ55 473 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 TAF6LQ9Y6J9 622 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 DNAJC8O75937 253 aaPredicted RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 CD44P16070 742 aaKnown RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 HK2P52789 917 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 GFPT1Q06210 699 aaPredicted RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 MYO1EQ12965 1108 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PCBP1Q15365 356 aaKnown RBP eCLIP7.79□□□□□ -1.16
VTA1-202ENST00000367630 ARHGAP44Q17R89 818 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 C4orf19Q8IY42 314 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 PPM1KQ8N3J5 372 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 SMCR8Q8TEV9 937 aaPredicted RBP7.79□□□□□ -1.16
VTA1-202ENST00000367630 COA7Q96BR5 231 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 ZSWIM1Q9BR11 485 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 KLC2Q9H0B6 622 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 KCNMB3Q9NPA1 279 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 MYPNQ86TC9 1320 aa7.79□□□□□ -1.16
VTA1-202ENST00000367630 HNRNPDLO14979 420 aaKnown RBP7.78□□□□□ -1.16
VTA1-202ENST00000367630 NUDT17P0C025 328 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms