RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LINC01565O15544 149 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 NCK2O43639 380 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 EYA4O95677 639 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 F13A1P00488 732 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 ZSCAN22P10073 491 aaPredicted RBP16.24■□□□□ 0.19
SF3B5-201ENST00000367569 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
SF3B5-201ENST00000367569 MBTD1Q05BQ5 628 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 CLUL1Q15846 466 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 SLC24A5Q71RS6 500 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 MCPH1Q8NEM0 835 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 C1orf112Q9NSG2 853 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 RNF19AQ9NV58 838 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 TSPAN1O60635 241 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 ERLIN2O94905 339 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 BMP15O95972 392 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 EDN1P05305 212 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
SF3B5-201ENST00000367569 CYP11B2P19099 503 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 PLCG1P19174 1290 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 IRS1P35568 1242 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 TFDP1Q14186 410 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
SF3B5-201ENST00000367569 NAALADL2Q58DX5 795 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 CLLU1OSQ5K130 101 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 DNM3Q9UQ16 869 aa16.23■□□□□ 0.19
SF3B5-201ENST00000367569 TDRD15B5MCY1 1934 aaKnown RBP16.22■□□□□ 0.19
SF3B5-201ENST00000367569 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 HIP1RO75146 1068 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 TBX10O75333 385 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 PBX3P40426 434 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 UBA7P41226 1012 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 PTENP60484 403 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 ZP2Q05996 745 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 ADAM15Q13444 863 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 STK38Q15208 465 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 SRGAP1Q7Z6B7 1085 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 ADGRD2Q7Z7M1 963 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 DAW1Q8N136 415 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 POF1BQ8WVV4 589 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 EIF2AQ9BY44 585 aaKnown RBP16.22■□□□□ 0.19
SF3B5-201ENST00000367569 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
SF3B5-201ENST00000367569 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 FAM50BQ9Y247 325 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 INPP5FQ9Y2H2 1132 aa16.22■□□□□ 0.19
SF3B5-201ENST00000367569 TCHHQ07283 1943 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 SFI1A8K8P3 1242 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 ASAP2O43150 1006 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 MBTPS2O43462 519 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 MUTP22033 750 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.19
SF3B5-201ENST00000367569 PLA2G5P39877 138 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 CDC42EP1Q00587 391 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 MCM6Q14566 821 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 SMAD2Q15796 467 aaKnown RBP16.21■□□□□ 0.19
SF3B5-201ENST00000367569 AMHR2Q16671 573 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 HYIQ5T013 277 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 UBXN11Q5T124 520 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
SF3B5-201ENST00000367569 RINT1Q6NUQ1 792 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
SF3B5-201ENST00000367569 CALML4Q96GE6 196 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 FAM105AQ9NUU6 356 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 HES2Q9Y543 173 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 PCDHGC5Q9Y5F6 944 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
SF3B5-201ENST00000367569 ARF4P18085 180 aaPredicted RBP16.2■□□□□ 0.18
SF3B5-201ENST00000367569 HOXA11P31270 313 aaPredicted RBP16.2■□□□□ 0.18
SF3B5-201ENST00000367569 PEX3P56589 373 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 FAM189BP81408 668 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 MAPK7Q13164 816 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 TPRNQ4KMQ1 711 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 ZNF598Q86UK7 904 aaKnown RBP16.2■□□□□ 0.18
SF3B5-201ENST00000367569 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 ADHFE1Q8IWW8 467 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 ZNF710Q8N1W2 664 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 DEPTORQ8TB45 409 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 FAM122AQ96E09 287 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 AK8Q96MA6 479 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 NT5C3AQ9H0P0 336 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 DACT1Q9NYF0 836 aa16.2■□□□□ 0.18
SF3B5-201ENST00000367569 A0A0U1RQF3 1178 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 NPTXRO95502 500 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 PRKCBP05771 671 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 ALADP13716 330 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 NASPP49321 788 aaPredicted RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms