RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 LRRC31Q6UY01 552 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SCUBE1Q8IWY4 988 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 GALNT6Q8NCL4 622 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 FCGR1BQ92637 280 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF512BQ96KM6 892 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 OSBPL1AQ9BXW6 950 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MAGEB5Q9BZ81 275 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MAP3K20Q9NYL2 800 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CYB5R1Q9UHQ9 305 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ATXN3P54252 364 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ALX1Q15699 326 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CGREF1Q99674 301 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 IRGMA1A4Y4 181 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TCEA3O75764 348 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CCT8P50990 548 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF420Q8TAQ5 688 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 GMNCA6NCL1 334 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ABHD2P08910 425 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SRGAP2BP0DMP2 458 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF174Q15697 407 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ARCQ7LC44 396 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF677Q86XU0 584 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 GSPT1P15170 499 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 THEMISQ8N1K5 641 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CLEC4MQ9H2X3 399 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 C6orf203Q9P0P8 240 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 BAG2O95816 211 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 FAM86C1Q9NVL1 165 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 HERC4Q5GLZ8 1057 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MCCC1Q96RQ3 725 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ADAMTS2O95450 1211 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 IFNA14P01570 189 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MAGEA4P43358 317 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CCT5P48643 541 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MFSD5Q6N075 450 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TOM1L2Q6ZVM7 507 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 NET1Q7Z628 596 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TSSK1BQ9BXA7 367 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 HMG20AQ9NP66 347 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TRIM66O15016 1216 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZKSCAN3Q9BRR0 538 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MRPS26Q9BYN8 205 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ATP1A3P13637 1013 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RORAP35398 523 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 FAM133BQ5BKY9 247 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RPS6KC1Q96S38 1066 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 HTATIP2Q9BUP3 242 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 EURLQ9NYK6 297 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PKD2L2Q9NZM6 624 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 NEBLO76041 1014 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 HLA-FP30511 346 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CCNG1P51959 295 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ALDH18A1P54886 795 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 FKBP3Q00688 224 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SMIM5Q71RC9 77 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 COQ7Q99807 217 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RAD21L1Q9H4I0 556 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TRIM45Q9H8W5 580 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CAPN11Q9UMQ6 739 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PIK3CDO00329 1044 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MAGEB3O15480 346 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 METAP2P50579 478 aaKnown RBP eCLIP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ITGADQ13349 1161 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TPCN2Q8NHX9 752 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 OTUB1Q96FW1 271 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZSWIM6Q9HCJ5 1215 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CDY2AQ9Y6F7 541 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CDY1Q9Y6F8 540 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SYNCRIPO60506 623 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 C12orf60Q5U649 245 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 G2E3Q7L622 706 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MYD88Q99836 296 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ADAM33Q9BZ11 813 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PCDH18Q9HCL0 1135 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KRT75O95678 551 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ACAP2Q15057 778 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MOXD1Q6UVY6 613 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SHCBP1LQ9BZQ2 653 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 GRIN2AQ12879 1464 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MINDY4BA8MYZ0 360 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SH3BP5O60239 455 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CDK16Q00536 496 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CCDC58Q4VC31 144 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ADGRG6Q86SQ4 1221 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF589Q86UQ0 364 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PDIK1LQ8N165 341 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM237Q96Q45 408 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PRR29P0C7W0 189 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 CIITAP33076 1130 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 SERPINB9P50453 376 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 HSD17B12Q53GQ0 312 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 RABGAP1LQ5R372 815 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 NEK5Q6P3R8 708 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 ABCC10Q5T3U5 1492 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PCDH11XQ9BZA7 1347 aa3.98□□□□□ -1.77
SYNE1-207ENST00000367255 PABPC1P11940 636 aaKnown RBP3.98□□□□□ -1.77
SYNE1-207ENST00000367255 C6orf10Q5SRN2 563 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms