RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ATRXP46100 2492 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRIM43BA6NCK2 446 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 PJA2O43164 708 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 XPOTO43592 962 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 ABL2P42684 1182 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZNF211Q13398 564 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRRC8EQ6NSJ5 796 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 AGAP11Q8TF27 550 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 GRID2IPA4D2P6 1211 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 GNA14O95837 355 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 FRA10AC1Q70Z53 315 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 KRT25Q7Z3Z0 450 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 METTL23Q86XA0 190 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 GIPC2Q8TF65 315 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRCH1Q9Y2L9 728 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRRN2O75325 713 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 TECP42680 631 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 CCNI2Q6ZMN8 369 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 TMC4Q7Z404 712 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 PRPF39Q86UA1 669 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 KLC2Q9H0B6 622 aa11.72□□□□□ -0.53
CDC42BPA-205ENST00000366769 KCNJ2P63252 427 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 AGR3Q8TD06 166 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 INPP5DQ92835 1189 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 TSPAN18Q96SJ8 248 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 IFNA8P32881 189 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 SERPINB8P50452 374 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRIM33Q9UPN9 1127 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 TTC33Q6PID6 262 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 CASKIN2Q8WXE0 1202 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 MYL1P05976 194 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 HIC1Q14526 733 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 DDX42Q86XP3 938 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 SPATA4Q8NEY3 305 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZFYVE1Q9HBF4 777 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 PRR23D1E9PI22 279 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 PRR23D2P0DMB1 279 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 KHDRBS2Q5VWX1 349 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 NIM1KQ8IY84 436 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 EPS8L3Q8TE67 593 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 TTI1O43156 1089 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 UPP2O95045 317 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 TBATAQ96M53 351 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 TUBA8Q9NY65 449 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 ARPC4P59998 168 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 NR1D2Q14995 579 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 PLEKHM3Q6ZWE6 761 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 C7orf31Q8N865 590 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 TIMM10P62072 90 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZBED6P86452 979 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 SLC39A14Q15043 492 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 DMAP1Q9NPF5 467 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 PANK4Q9NVE7 773 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 CHEK2O96017 543 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 HSPA6P17066 643 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 NCAPHQ15003 741 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 PKD2L2Q9NZM6 624 aa11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.54
CDC42BPA-205ENST00000366769 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC22O60826 627 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 HSD17B3P37058 310 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 NSFP46459 744 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 KCTD6Q8NC69 237 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 PRDM5Q9NQX1 630 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 GINM1Q9NU53 330 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 DNALI1O14645 258 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 RTN3O95197 1032 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 CLCN2P51788 898 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT17Q04695 432 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 SMAD5Q99717 465 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms