RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 FSD2A1L4K1 749 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 C9IYK1 514 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 LAD1O00515 517 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 BACH1O14867 736 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 PI15O43692 258 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ZNF862O60290 1169 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 HBP1O60381 514 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 GPR32O75388 356 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 VTNP04004 478 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 CDC25AP30304 524 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 PBX3P40426 434 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ME1P48163 572 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SARSP49591 514 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SLC26A2P50443 739 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 CLCN5P51795 746 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 NFX1Q12986 1120 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ANGPT1Q15389 498 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 KIZQ2M2Z5 673 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ARL6IP4Q66PJ3 421 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 NCAPH2Q6IBW4 605 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 FAM228AQ86W67 206 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 CCDC105Q8IYK2 499 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SLFN12Q8IYM2 578 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 NME8Q8N427 588 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 LINC01465Q8N7H1 131 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 FAM20AQ96MK3 541 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 RIT2Q99578 217 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 OSMRQ99650 979 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ADAM2Q99965 735 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 TEKT3Q9BXF9 490 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SCAND2PQ9GZW5 306 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 AAASQ9NRG9 546 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ST3GAL5Q9UNP4 418 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 SRPRBQ9Y5M8 271 aaKnown RBP9.12□□□□□ -0.95
MRPL55-211ENST00000366738 ATRXP46100 2492 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 COL1A2P08123 1366 aa9.12□□□□□ -0.95
MRPL55-211ENST00000366738 EVPLQ92817 2033 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 A0A087X0B3 334 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 M0QZ92 97 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 MARCH6O60337 910 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 RPS6KA5O75582 802 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 FGFR1P11362 822 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 NPR3P17342 541 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 CLCN3P51790 818 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 DSC3Q14574 896 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 UGCGQ16739 394 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 ZNF484Q5JVG2 852 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 MIS18BP1Q6P0N0 1132 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 DTHD1Q6ZMT9 781 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 TDRD5Q8NAT2 981 aaKnown RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 FEZF2Q8TBJ5 459 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 LRRC15Q8TF66 581 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 MRPS27Q92552 414 aaKnown RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 EPSTI1Q96J88 318 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 ZNF668Q96K58 619 aaPredicted RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 GBP4Q96PP9 640 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 MMTAG2Q9BU76 263 aaKnown RBP9.11□□□□□ -0.95
MRPL55-211ENST00000366738 GOLPH3LQ9H4A5 285 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 CWH43Q9H720 699 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 RGS18Q9NS28 235 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 RNF19AQ9NV58 838 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 GABBR1Q9UBS5 961 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 PCDHB7Q9Y5E2 793 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 WDR81Q562E7 1941 aa9.11□□□□□ -0.95
MRPL55-211ENST00000366738 CEP295Q9C0D2 2601 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 TMEM150BA6NC51 233 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 CUTAO60888 179 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
MRPL55-211ENST00000366738 MED24O75448 989 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 STBD1O95210 358 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 AOC1P19801 751 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 CRYBB1P53674 252 aaPredicted RBP9.1□□□□□ -0.95
MRPL55-211ENST00000366738 FAM189BP81408 668 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 DRP2Q13474 957 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 ECM1Q16610 540 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 RARS2Q5T160 578 aaKnown RBP9.1□□□□□ -0.95
MRPL55-211ENST00000366738 FAM160B1Q5W0V3 765 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 PDE12Q6L8Q7 609 aaKnown RBP9.1□□□□□ -0.95
MRPL55-211ENST00000366738 CES5AQ6NT32 575 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 ZNF746Q6NUN9 644 aaPredicted RBP9.1□□□□□ -0.95
MRPL55-211ENST00000366738 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 SLC24A5Q71RS6 500 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 CKAP2LQ8IYA6 745 aa9.1□□□□□ -0.95
MRPL55-211ENST00000366738 LRRC71Q8N4P6 559 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms