RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 COL9A1P20849 921 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RPA1P27694 616 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 AXLP30530 894 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TECP42680 631 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TRAPPC10P48553 1259 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TOB1P50616 345 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 LONRF3Q496Y0 759 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 GLB1LQ6UWU2 654 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MRPL43Q8N983 215 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SMG8Q8ND04 991 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 NT5C1B-RDH14C9J2C7 533 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 GALTP07902 379 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 OR52Z1P0C646 297 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 RABEP1Q15276 862 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 TTC38Q5R3I4 469 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 PLPP4Q5VZY2 271 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 SUSD6Q92537 303 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 IGSF21Q96ID5 467 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 LRFN3Q9BTN0 628 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 S1PR5Q9H228 398 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 DNAJB4Q9UDY4 337 aa15.2■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CNTNAP2Q9UHC6 1331 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CARNS1A5YM72 827 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 DDHD2O94830 711 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 MUTP22033 750 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 TFDP1Q14186 410 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 TMC7Q7Z402 723 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 DDX53Q86TM3 631 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CNNM3Q8NE01 707 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 NACC1Q96RE7 527 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 EIF2AQ9BY44 585 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ZBP1Q9H171 429 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 IRAK3Q9Y616 596 aa15.19■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ZC3H11AO75152 810 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CD2BP2O95400 341 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 EFEMP2O95967 443 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 SLC11A1P49279 550 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 PDIA5Q14554 519 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 NBR1Q14596 966 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 SMC1AQ14683 1233 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ECM1Q16610 540 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CDCA2Q69YH5 1023 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 NOTUMQ6P988 496 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 SYCE2Q6PIF2 218 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CSRNP2Q9H175 543 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 POLR3FQ9H1D9 316 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 GPRC5CQ9NQ84 441 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ENTPD7Q9NQZ7 604 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 INPP5FQ9Y2H2 1132 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 USP15Q9Y4E8 981 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 IPPQ9Y573 584 aa15.18■□□□□ 0.02
TNFRSF1A-202ENST00000366159 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 LOC730098B7Z3J9 87 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 INO80B-WBP1J3KQ70 363 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ERLIN2O94905 339 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CTSAP10619 480 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ALADP13716 330 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CBX2Q14781 532 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 TMEM31Q5JXX7 168 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ANKRD54Q6NXT1 300 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 VPS52Q8N1B4 723 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 IGSF22Q8N9C0 903 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 TMEM169Q96HH4 297 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 FZD8Q9H461 694 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 RAPGEFL1Q9UHV5 662 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 PCDHB6Q9Y5E3 794 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 B4GALT5O43286 388 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 DCXO43602 365 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CLASP2O75122 1294 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CXCL14O95715 111 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 ITGA4P13612 1032 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 CYP11B2P19099 503 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 DSC1Q08554 894 aa15.17■□□□□ 0.02
TNFRSF1A-202ENST00000366159 PTGDRQ13258 359 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms