RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SGTAO43765 313 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PARP1P09874 1014 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SPATA31C1P0DKV0 1188 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GSPT1P15170 499 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CCT2P78371 535 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SLC6A3Q01959 620 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 G3BP1Q13283 466 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 IL10RAQ13651 578 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PRKG1Q13976 671 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MYBPC3Q14896 1274 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NR0B2Q15466 257 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ARL13BQ3SXY8 428 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FKBP15Q5T1M5 1219 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GJC2Q5T442 439 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FAAH2Q6GMR7 532 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SLFN12LQ6IEE8 588 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 LMBR1LQ6UX01 489 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 C1orf122Q6ZSJ8 110 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 COL23A1Q86Y22 540 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SPACA3Q8IXA5 215 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RBM12BQ8IXT5 1001 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CACNA2D3Q8IZS8 1091 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CCDC33Q8N5R6 958 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MSL3Q8N5Y2 521 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RNF152Q8N8N0 203 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 C3orf20Q8ND61 904 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PLBD2Q8NHP8 589 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CLEC4DQ8WXI8 215 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SEC14L1Q92503 715 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ERP27Q96DN0 273 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ASIC4Q96FT7 647 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SUCLG2Q96I99 432 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MSLNLQ96KJ4 702 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ZSCAN31Q96LW9 406 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 JMJD8Q96S16 334 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 C14orf93Q9H972 538 aaKnown RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 EPB41L4AQ9HCS5 686 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CLIC5Q9NZA1 410 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CCDC39Q9UFE4 941 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 EVLQ9UI08 416 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ASAP1Q9ULH1 1129 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PCDHB4Q9Y5E5 795 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SNX11Q9Y5W9 270 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KAT6BQ8WYB5 2073 aa4.4□□□□□ -1.71
RNU6-1249P-201ENST00000363237 A0A0U1RQG5 324 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PRAMEF22A3QJZ6 481 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RRN3P2A6NIE6 340 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PRSS47A8MTI9 375 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 H3BUI4 141 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ACOT7O00154 380 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MYO1FO00160 1098 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 IRAK2O43187 625 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FIBPO43427 364 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NRP2O60462 931 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PLA2G6O60733 806 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MBD4O95243 580 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PAPLNO95428 1278 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ESR1P03372 595 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NTRK1P04629 796 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CEACAM5P06731 702 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 XPAP23025 273 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 AOAHP28039 575 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PDIA3P30101 505 aaKnown RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ADMP35318 185 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KIR2DL1P43626 348 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KIR2DL2P43627 348 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 HSPA7P48741 367 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ALDH9A1P49189 494 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SNRPNP63162 240 aaKnown RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FMO1Q01740 532 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PPARAQ07869 468 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MGAT2Q10469 447 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FOXO1Q12778 655 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NOGQ13253 232 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GRM1Q13255 1194 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CNGA2Q16280 664 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TAF12Q16514 161 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MPEG1Q2M385 716 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ZACNQ401N2 412 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CCDC93Q567U6 631 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 UNQ6494/PRO21346Q6UXR6 183 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ZNF765Q7L2R6 523 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SLCO6A1Q86UG4 719 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CABP7Q86V35 215 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DCP2Q8IU60 420 aaKnown RBP4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CDYL2Q8N8U2 506 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TTLL11Q8NHH1 800 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CALML6Q8TD86 181 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GAB3Q8WWW8 586 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DPF2Q92785 391 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KAT5Q92993 513 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MAP6Q96JE9 813 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NT5C1BQ96P26 610 aa4.39□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RMDN3Q96TC7 470 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms