RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 MAN1C1Q9NR34 630 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 EPS15L1Q9UBC2 864 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 FAN1Q9Y2M0 1017 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 PCDHB2Q9Y5E7 798 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 DMXL1Q9Y485 3027 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 MEIS3P2A8K0S8 358 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 MAFO75444 373 aaPredicted RBP15.54■□□□□ 0.08
VPS29-201ENST00000360579 SOD2P04179 222 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 CFHP08603 1231 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 ZNF280BQ86YH2 543 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 NLRP4Q96MN2 994 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 RSAD1Q9HA92 442 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 AGPAT5Q9NUQ2 364 aa15.54■□□□□ 0.08
VPS29-201ENST00000360579 CLUHO75153 1309 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 CCDC195A0A1B0GUA6 201 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 ADAMTS3O15072 1205 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 NARSO43776 548 aaKnown RBP15.53■□□□□ 0.08
VPS29-201ENST00000360579 GLUD1P00367 558 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 C1RP00736 705 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 SRFP11831 508 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 AK2P54819 239 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 AGMOQ6ZNB7 445 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 DGLUCYQ7Z3D6 616 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
VPS29-201ENST00000360579 EXOC8Q8IYI6 725 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
VPS29-201ENST00000360579 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 HDAC7Q8WUI4 952 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 RPS6KC1Q96S38 1066 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 CEP89Q96ST8 783 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 HERC2P3Q9BVR0 1158 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 UBN1Q9NPG3 1134 aa15.53■□□□□ 0.08
VPS29-201ENST00000360579 NID2Q14112 1375 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 KRBA1A5PL33 1030 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 NRP1O14786 923 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 N4BP1O75113 896 aaKnown RBP15.52■□□□□ 0.08
VPS29-201ENST00000360579 PSMD10O75832 226 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 DDHD2O94830 711 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 Q4G0T1 1027 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 PHLDB3Q6NSJ2 640 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 SLC44A3Q8N4M1 653 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 CNNM3Q8NE01 707 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 RMDN1Q96DB5 314 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.08
VPS29-201ENST00000360579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.52■□□□□ 0.08
VPS29-201ENST00000360579 FRYLO94915 3013 aa15.52■□□□□ 0.07
VPS29-201ENST00000360579 DDX11L8A8MPP1 907 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 C2CD2LO14523 706 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 INPPL1O15357 1258 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 TEX28O15482 410 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 B4GALT3O60512 393 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 NR1I2O75469 434 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 STBD1O95210 358 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 GLUD2P49448 558 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 PUM1Q14671 1186 aaKnown RBP eCLIP15.51■□□□□ 0.07
VPS29-201ENST00000360579 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 SLC7A3Q8WY07 619 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 SMG7Q92540 1137 aaKnown RBP15.51■□□□□ 0.07
VPS29-201ENST00000360579 HINFPQ9BQA5 517 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 RNF26Q9BY78 433 aaPredicted RBP15.51■□□□□ 0.07
VPS29-201ENST00000360579 PLEKHA4Q9H4M7 779 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 IFT122Q9HBG6 1241 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 CA14Q9ULX7 337 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 SIT1Q9Y3P8 196 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 PPME1Q9Y570 386 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 R4GN57 208 aa15.51■□□□□ 0.07
VPS29-201ENST00000360579 TMEM150BA6NC51 233 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 DKC1O60832 514 aaKnown RBP eCLIP15.5■□□□□ 0.07
VPS29-201ENST00000360579 PAPLNO95428 1278 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 POMCP01189 267 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
VPS29-201ENST00000360579 CLCN6P51797 869 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 PSMC5P62195 406 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 ANO5Q75V66 913 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 KIAA2013Q8IYS2 634 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 TBCKQ8TEA7 893 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 RUBCNQ92622 972 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 PHKBQ93100 1093 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 BORCS6Q96GS4 357 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 SH2D3AQ9BRG2 576 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 PIDD1Q9HB75 910 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 RXFP1Q9HBX9 757 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 SH3GLB2Q9NR46 395 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 ARHGEF3Q9NR81 526 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 ZDHHC7Q9NXF8 308 aa15.5■□□□□ 0.07
VPS29-201ENST00000360579 CYP3A7-CYP3A51PA0A087WV96 503 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 EDIL3O43854 480 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 CYP3A7P24462 503 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 OR1G1P47890 313 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 NLRP5P59047 1200 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 PCBP1Q15365 356 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS29-201ENST00000360579 KIAA0319Q5VV43 1072 aa15.49■□□□□ 0.07
VPS29-201ENST00000360579 Q6ZUG5 572 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms