RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 NR1H3Q13133 447 aa13.52□□□□□ -0.25
LDLRAD4-201ENST00000359446 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
LDLRAD4-201ENST00000359446 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.25
LDLRAD4-201ENST00000359446 ZNF564Q8TBZ8 553 aaPredicted RBP13.52□□□□□ -0.25
LDLRAD4-201ENST00000359446 ATXN7L3BQ96GX2 97 aa13.52□□□□□ -0.25
LDLRAD4-201ENST00000359446 ARIH2O95376 493 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MOCS2O96007 188 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 RUBCNLQ9H714 662 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 PCDHGB4Q9UN71 923 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 KRT87PA6NCN2 255 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 FAM102AQ5T9C2 384 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MLXIPLQ9NP71 852 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 SELENONQ9NZV5 590 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MYO3BQ8WXR4 1341 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 SRGAP2O75044 1071 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 TBC1D1Q86TI0 1168 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 NSUN6Q8TEA1 469 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 SWSAP1Q6NVH7 229 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ZFYVE19Q96K21 471 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 YIPF2Q9BWQ6 316 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 LAMC1P11047 1609 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MIF4GDA9UHW6 222 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MFAP3LO75121 409 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 GRIK1P39086 918 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ITPRIPL1Q6GPH6 555 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 B4GALNT2Q8NHY0 566 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 EML4Q9HC35 981 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ATP7BP35670 1465 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ATP5HO75947 161 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 LCP1P13796 627 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MCAMP43121 646 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 AP2B1P63010 937 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 FAM217BQ9NTX9 383 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 DDX5P17844 614 aaKnown RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ZNF235Q14590 738 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ZNF507Q8TCN5 953 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 GABBR1Q9UBS5 961 aa13.51□□□□□ -0.25
LDLRAD4-201ENST00000359446 ECE2O60344 883 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 RAD51Q06609 339 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 CACNB2Q08289 660 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 C11orf70Q9BRQ4 267 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 TRIM62Q9BVG3 475 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 A0A087WUV0 522 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 CTIFO43310 598 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 RALAP11233 206 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 MAP4P27816 1152 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 LRRC23Q53EV4 343 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 PPP1R36Q96LQ0 422 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 ZC3H4Q9UPT8 1303 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 SERPIND1P05546 499 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 KRT76Q01546 638 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 AARS2Q5JTZ9 985 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 CC2D1AQ6P1N0 951 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 ICA1LQ8NDH6 482 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 AGR3Q8TD06 166 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 PIH1D3Q9NQM4 214 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 CLCN6P51797 869 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
LDLRAD4-201ENST00000359446 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms