RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 BICD1Q96G01 975 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 AGO3Q9H9G7 860 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 PADI3Q9ULW8 664 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 TBX20Q9UMR3 447 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 ST3GAL5Q9UNP4 418 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 GDAQ9Y2T3 454 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 LAMA2P24043 3122 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 UBE4BO95155 1302 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 PPP1R37O75864 691 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 CSF2RAP15509 400 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 PRPF4BQ13523 1007 aaKnown RBP16.75■□□□□ 0.27
TPM1-206ENST00000358278 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
TPM1-206ENST00000358278 TAS1R3Q7RTX0 852 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 TRIML1Q8N9V2 468 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 BADQ92934 168 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 LBHD1Q9BQE6 289 aaPredicted RBP16.75■□□□□ 0.27
TPM1-206ENST00000358278 FZD8Q9H461 694 aa16.75■□□□□ 0.27
TPM1-206ENST00000358278 ACKR2O00590 384 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 PRPF6O94906 941 aaKnown RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 L1TD1Q5T7N2 865 aaKnown RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 MAP4K3Q8IVH8 894 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 MYOCDQ8IZQ8 938 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 SEPT8Q92599 483 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 ACCSQ96QU6 501 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 MRPL4Q9BYD3 311 aaKnown RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 PIN4Q9Y237 131 aaKnown RBP16.74■□□□□ 0.27
TPM1-206ENST00000358278 TRIP11Q15643 1979 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
TPM1-206ENST00000358278 B4GALT5O43286 388 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 TSPAN1O60635 241 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 KIF20AO95235 890 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 RGS19P49795 217 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 FPGSQ05932 587 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.271e-7■■□□□ 14.5
TPM1-206ENST00000358278 MORC3Q14149 939 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 GPNMBQ14956 572 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 PLEKHG4Q58EX7 1191 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 EPM2AIP1Q7L775 607 aaPredicted RBP16.73■□□□□ 0.27
TPM1-206ENST00000358278 RPUSD2Q8IZ73 545 aaKnown RBP16.73■□□□□ 0.27
TPM1-206ENST00000358278 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 KCNN1Q92952 543 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 EXOC7Q9UPT5 735 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 CXCL10P02778 98 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 EDN1P05305 212 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 PFKMP08237 780 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 LIG4P49917 911 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 KCNA1Q09470 495 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 STIM1Q13586 685 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 AMHR2Q16671 573 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 NELFCDQ8IXH7 590 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 APBB2Q92870 758 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 CPB2Q96IY4 423 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
TPM1-206ENST00000358278 LETM1O95202 739 aaPredicted RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 ARF4P18085 180 aaPredicted RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 AXLP30530 894 aa16.72■□□□□ 0.27
TPM1-206ENST00000358278 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
TPM1-206ENST00000358278 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
TPM1-206ENST00000358278 TARS2Q9BW92 718 aaKnown RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 IL23AQ9NPF7 189 aa16.72■□□□□ 0.27
TPM1-206ENST00000358278 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
TPM1-206ENST00000358278 TTC3P53804 2025 aa16.72■□□□□ 0.27
TPM1-206ENST00000358278 TTLL13PA6NNM8 815 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 BMP6P22004 513 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 MATR3P43243 847 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM1-206ENST00000358278 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
TPM1-206ENST00000358278 CNKSR3Q6P9H4 555 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 GUF1Q8N442 669 aaKnown RBP16.71■□□□□ 0.27
TPM1-206ENST00000358278 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 ZMYM2Q9UBW7 1377 aa16.71■□□□□ 0.27
TPM1-206ENST00000358278 N4BP3O15049 544 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 ACRP10323 421 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 HOXA11P31270 313 aaPredicted RBP16.7■□□□□ 0.26
TPM1-206ENST00000358278 PRCPP42785 496 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
TPM1-206ENST00000358278 ZPBP2Q6X784 338 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
TPM1-206ENST00000358278 ACO2Q99798 780 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms