RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 KLRF2D3W0D1 207 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 STXBP3O00186 592 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 HMOX2P30519 316 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 STAT2P52630 851 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 PLTPP55058 493 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 CSNK2BP67870 215 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 IL31Q6EBC2 164 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 INTS9Q9NV88 658 aaKnown RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 STMN3Q9NZ72 180 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 SATB2Q9UPW6 733 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 PYGBP11216 843 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 PDIA3P30101 505 aaKnown RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 SLC44A2Q8IWA5 706 aaPredicted RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 ACTR5Q9H9F9 607 aaPredicted RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 AOC3Q16853 763 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 C11orf88Q6PI97 169 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 ZNF438Q7Z4V0 828 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 DYNLL2Q96FJ2 89 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 SAR1BQ9Y6B6 198 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 A0A0G2JND7 137 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 NUDT14O95848 222 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 PAN2Q504Q3 1202 aaKnown RBP10.36□□□□□ -0.75
CHD3-202ENST00000358181 ERICH1Q86X53 443 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 V9GYQ6 96 aa10.36□□□□□ -0.75
CHD3-202ENST00000358181 POTEB3A0JP26 581 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 CXCR5P32302 372 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 COPS2P61201 443 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 CUL3Q13618 768 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 FASTKD1Q53R41 847 aaKnown RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 SCARA3Q6AZY7 606 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 POTEBQ6S5H4 581 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ZBTB38Q8NAP3 1195 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 NFE2L3Q9Y4A8 694 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PCDHGA3Q9Y5H0 932 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ATP7AQ04656 1500 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 SNAP23O00161 211 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 YWHAQP27348 245 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 CHRNA3P32297 505 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ST13P50502 369 aaKnown RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 PEX5P50542 639 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 CNGA2Q16280 664 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 MDH1BQ5I0G3 518 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ACAD11Q709F0 780 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 EFHBQ8N7U6 833 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 TMEM245Q9H330 911 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 LSM7Q9UK45 103 aaKnown RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 FAM32AQ9Y421 112 aaKnown RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 TLR2O60603 784 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 KRT33AO76009 404 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 BRAFP15056 766 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 MIER2Q8N344 545 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PYROXD1Q8WU10 500 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 USP44Q9H0E7 712 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 RAB23Q9ULC3 237 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ATP10AO60312 1499 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ATP9BO43861 1147 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 FGAP02671 866 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PCSK7Q16549 785 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 GSTA3Q16772 222 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 TCP11Q8WWU5 503 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PKP3Q9Y446 797 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 C21orf2O43822 256 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PSMC2P35998 433 aaKnown RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 ETFBP38117 255 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ACAP3Q96P50 834 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ZNF556Q9HAH1 456 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PCDHB7Q9Y5E2 793 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ZNF804BA4D1E1 1349 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 TNKSO95271 1327 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 LINC00854A0A1B0GVQ3 168 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 RPN2P04844 631 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ESRRAP11474 423 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 KRT20P35900 424 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 C2orf54Q08AI8 447 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 UBE2SQ16763 222 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 HAUS6Q7Z4H7 955 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 ARL8AQ96BM9 186 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
CHD3-202ENST00000358181 COQ6Q9Y2Z9 468 aa10.35□□□□□ -0.75
CHD3-202ENST00000358181 EXOC1LA0A1B0GW35 172 aa10.34□□□□□ -0.75
CHD3-202ENST00000358181 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms