RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 HSPA1LP34931 641 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 ZNF131P52739 623 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 SLC47A2Q86VL8 602 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 STK24Q9Y6E0 443 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 ANKRD62A6NC57 917 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 MEFVO15553 781 aaPredicted RBP22.08■■□□□ 1.12
COL13A1-202ENST00000357811 EIF2AK2P19525 551 aaKnown RBP22.08■■□□□ 1.12
COL13A1-202ENST00000357811 POU5F1Q01860 360 aaKnown RBP22.08■■□□□ 1.12
COL13A1-202ENST00000357811 SLC15A2Q16348 729 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 C2CD6Q53TS8 623 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC25Q86WR0 208 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 MKNK1Q9BUB5 465 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 TOPORSQ9NS56 1045 aaPredicted RBP22.08■■□□□ 1.12
COL13A1-202ENST00000357811 INTUQ9ULD6 942 aa22.08■■□□□ 1.12
COL13A1-202ENST00000357811 MRPL11Q9Y3B7 192 aaKnown RBP22.08■■□□□ 1.12
COL13A1-202ENST00000357811 NRXN2Q9P2S2 1712 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 ENTPD3O75355 529 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 ALAS1P13196 640 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 COMTP21964 271 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 SP4Q02446 784 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 JAMLQ86YT9 394 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 GPATCH11Q8N954 259 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 CYFIP2Q96F07 1278 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 ATAD5Q96QE3 1844 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 MYCLP12524 364 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-202ENST00000357811 NBPF9Q3BBW0 867 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 CBWD2Q8IUF1 395 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC113Q9H0I3 377 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 USP20Q9Y2K6 914 aa22.07■■□□□ 1.12
COL13A1-202ENST00000357811 GOLGA6L10A0A0M3HER8 536 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC169A6NNP5 214 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 BCRP11274 1271 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 PTENP60484 403 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 SPP2Q13103 211 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 RUFY4Q6ZNE9 571 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 CHURC1Q8WUH1 139 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 DHX38Q92620 1227 aaKnown RBP22.06■■□□□ 1.12
COL13A1-202ENST00000357811 SELENOSQ9BQE4 189 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 ERP44Q9BS26 406 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 HSPBP1Q9NZL4 362 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 SLC12A6Q9UHW9 1150 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 NCANO14594 1321 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 IBSPP21815 317 aaPredicted RBP22.06■■□□□ 1.12
COL13A1-202ENST00000357811 FGFR4P22455 802 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 PPP2R2AP63151 447 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 UGCGQ16739 394 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 LRIG3Q6UXM1 1119 aa22.06■■□□□ 1.12
COL13A1-202ENST00000357811 LARSQ9P2J5 1176 aaKnown RBP22.06■■□□□ 1.12
COL13A1-202ENST00000357811 FAM107AO95990 144 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 MMEP08473 750 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 SPRED3Q2MJR0 410 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 FAM102BQ5T8I3 360 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 TTC27Q6P3X3 843 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 NOP9Q86U38 636 aaKnown RBP22.05■■□□□ 1.12
COL13A1-202ENST00000357811 MXRA8Q9BRK3 442 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 FAM114A2Q9NRY5 505 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 DNAJC17Q9NVM6 304 aaKnown RBP22.05■■□□□ 1.12
COL13A1-202ENST00000357811 SEL1LQ9UBV2 794 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 ODF2LQ9ULJ1 636 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 QSER1Q2KHR3 1735 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 PPP2R5AQ15172 486 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 DLGAP5Q15398 846 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 RAPGEF5Q92565 580 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 MRIQ9BWK5 157 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 RANBP17Q9H2T7 1088 aaKnown RBP22.05■■□□□ 1.12
COL13A1-202ENST00000357811 ZNF70Q9UC06 446 aaPredicted RBP22.05■■□□□ 1.12
COL13A1-202ENST00000357811 GMNCA6NCL1 334 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 PYGMP11217 842 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC38Q502W7 563 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 C1orf220Q5T0J3 134 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 DAB2IPQ5VWQ8 1189 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 HAUS6Q7Z4H7 955 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 CARD9Q9H257 536 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 SEMA4AQ9H3S1 761 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 VCPKMTQ9H867 229 aa22.05■■□□□ 1.12
COL13A1-202ENST00000357811 RAVER2Q9HCJ3 691 aaKnown RBP22.05■■□□□ 1.12
COL13A1-202ENST00000357811 SPDYE2BA6NHP3 402 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 ANKRD63C9JTQ0 380 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SPOPO43791 374 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 ADRB2P07550 413 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC172P0C7W6 258 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SPDYE6P0CI01 402 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 VCAM1P19320 739 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SF3B2Q13435 895 aaKnown RBP22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SNX1Q13596 522 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 ARFGAP2Q8N6H7 521 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 PRELID2Q8N945 189 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SEMA4DQ92854 862 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 RAB17Q9H0T7 212 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SLX4Q8IY92 1834 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 ANXA13P27216 316 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SSTR3P32745 418 aaPredicted RBP22.04■■□□□ 1.12
COL13A1-202ENST00000357811 RARRES1P49788 294 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 MXI1P50539 228 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 MTMR3Q13615 1198 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 SLC29A2Q14542 456 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 KIF22Q14807 665 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 PI4K2AQ9BTU6 479 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 ZNF341Q9BYN7 854 aa22.04■■□□□ 1.12
COL13A1-202ENST00000357811 TMEM117Q9H0C3 514 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms