RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HUS1O60921 280 aa10□□□□□ -0.81
UPF2-202ENST00000357604 CCL23P55773 120 aa10□□□□□ -0.81
UPF2-202ENST00000357604 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
UPF2-202ENST00000357604 LRRC43Q8N309 656 aa10□□□□□ -0.81
UPF2-202ENST00000357604 TMEM169Q96HH4 297 aa10□□□□□ -0.81
UPF2-202ENST00000357604 ARMCX3Q9UH62 379 aaPredicted RBP10□□□□□ -0.81
UPF2-202ENST00000357604 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
UPF2-202ENST00000357604 MED24O75448 989 aa10□□□□□ -0.81
UPF2-202ENST00000357604 SLITRK3O94933 977 aa10□□□□□ -0.81
UPF2-202ENST00000357604 GHRP10912 638 aa10□□□□□ -0.81
UPF2-202ENST00000357604 NAP1L1P55209 391 aaKnown RBP10□□□□□ -0.81
UPF2-202ENST00000357604 ITGB3BPQ13352 177 aaPredicted RBP10□□□□□ -0.81
UPF2-202ENST00000357604 KIZQ2M2Z5 673 aa10□□□□□ -0.81
UPF2-202ENST00000357604 TMEM119Q4V9L6 283 aa10□□□□□ -0.81
UPF2-202ENST00000357604 NT5DC4Q86YG4 428 aa10□□□□□ -0.81
UPF2-202ENST00000357604 FAM186BQ8IYM0 893 aa10□□□□□ -0.81
UPF2-202ENST00000357604 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
UPF2-202ENST00000357604 UBQLN1Q9UMX0 589 aaKnown RBP10□□□□□ -0.81
UPF2-202ENST00000357604 FOCADQ5VW36 1801 aa10□□□□□ -0.81
UPF2-202ENST00000357604 F2P00734 622 aa10□□□□□ -0.81
UPF2-202ENST00000357604 TIMP1P01033 207 aa10□□□□□ -0.81
UPF2-202ENST00000357604 COL6A1P12109 1028 aa10□□□□□ -0.81
UPF2-202ENST00000357604 KRT5P13647 590 aa10□□□□□ -0.81
UPF2-202ENST00000357604 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
UPF2-202ENST00000357604 KCNB1Q14721 858 aa10□□□□□ -0.81
UPF2-202ENST00000357604 NPAS4Q8IUM7 802 aa10□□□□□ -0.81
UPF2-202ENST00000357604 IGSF22Q8N9C0 903 aa10□□□□□ -0.81
UPF2-202ENST00000357604 LMBR1Q8WVP7 490 aa10□□□□□ -0.81
UPF2-202ENST00000357604 P2RX5Q93086 422 aa10□□□□□ -0.81
UPF2-202ENST00000357604 MBOAT7Q96N66 472 aa10□□□□□ -0.81
UPF2-202ENST00000357604 SPAG5Q96R06 1193 aa10□□□□□ -0.81
UPF2-202ENST00000357604 REEP2Q9BRK0 252 aa10□□□□□ -0.81
UPF2-202ENST00000357604 EXTL3O43909 919 aa10□□□□□ -0.81
UPF2-202ENST00000357604 CETN2P41208 172 aa10□□□□□ -0.81
UPF2-202ENST00000357604 TRIM14Q14142 442 aa10□□□□□ -0.81
UPF2-202ENST00000357604 KIF12Q96FN5 646 aa10□□□□□ -0.81
UPF2-202ENST00000357604 OSMRQ99650 979 aa10□□□□□ -0.81
UPF2-202ENST00000357604 TFAMQ00059 246 aaKnown RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 MYL5Q02045 173 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 GIT2Q14161 759 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 MTFR1Q15390 333 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 KNOP1Q1ED39 458 aaKnown RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 TRIM50Q86XT4 487 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 FLRT1Q9NZU1 646 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 A0A087WZ62 844 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 URODP06132 367 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 TMEM132DQ14C87 1099 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 ZFYVE27Q5T4F4 411 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 RINT1Q6NUQ1 792 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 DCP1BQ8IZD4 617 aaKnown RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 ZNF558Q96NG5 402 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 FDXACB1Q9BRP7 624 aaPredicted RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 NUP58Q9BVL2 599 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 PIDD1Q9HB75 910 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 DLATP10515 647 aaKnown RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 OXCT2Q9BYC2 517 aaPredicted RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 RWDD2AQ9UIY3 292 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 TBX20Q9UMR3 447 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 IGLV3-22A0A075B6J6 115 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 MED7O43513 233 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 NR2F2P24468 414 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 MFAP3P55082 362 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 GRB10Q13322 594 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 GBP6Q6ZN66 633 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 RUFY4Q6ZNE9 571 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 LENG1Q96BZ8 264 aaPredicted RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 NACA2Q9H009 215 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
UPF2-202ENST00000357604 VAV3Q9UKW4 847 aa9.99□□□□□ -0.81
UPF2-202ENST00000357604 PDXKO00764 312 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 NEBLO76041 1014 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ODC1P11926 461 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 BPIFB4P59827 614 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 UVSSAQ2YD98 709 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ZNF697Q5TEC3 545 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ISM2Q6H9L7 571 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 CYP2W1Q8TAV3 490 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 R3HDMLQ9H3Y0 253 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 HESX1Q9UBX0 185 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 GNEQ9Y223 722 aaKnown RBP9.98□□□□□ -0.81
UPF2-202ENST00000357604 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 GSTTP1A0A1W2PQM5 241 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
UPF2-202ENST00000357604 OSTNP61366 133 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 RBP5P82980 135 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 TRIM32Q13049 653 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 VEPH1Q14D04 833 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 THAP9Q9H5L6 903 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 SLC28A3Q9HAS3 691 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 PAK6Q9NQU5 681 aaPredicted RBP9.98□□□□□ -0.81
UPF2-202ENST00000357604 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 SYCE3A1L190 88 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 SPA17Q15506 151 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 RSAD1Q9HA92 442 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms