RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TSC22D1Q15714 1073 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 BEND6Q5SZJ8 279 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 FOXR2Q6PJQ5 311 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CCNI2Q6ZMN8 369 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 PABPC3Q9H361 631 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 BTBD7Q9P203 1132 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 HK2P52789 917 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 RNASE9P60153 205 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 OCRLQ01968 901 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ROR2Q01974 943 aaKnown RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ZNF662Q6ZS27 426 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ST13P5Q8NFI4 369 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 CASP10Q92851 521 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 DNAJC7Q99615 494 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-202ENST00000357162 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 RWDD3Q9Y3V2 267 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 GSTA4O15217 222 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SASH1O94885 1247 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TTLL1O95922 423 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ZBED1O96006 694 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 PGM1P36871 562 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 STILQ15468 1287 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 COPG2Q9UBF2 871 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 SLC13A4Q9UKG4 626 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 NEK10Q6ZWH5 1172 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ZNF677Q86XU0 584 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 RHOT1Q8IXI2 618 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 IFNL3Q8IZI9 196 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 TTC8Q8TAM2 541 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 ZNF398Q8TD17 642 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 NSL1Q96IY1 281 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 BHMT2Q9H2M3 363 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 DLC1Q96QB1 1528 aa6.97□□□□□ -1.29
VPS13B-202ENST00000357162 M0QZ92 97 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 HOXB8P17481 243 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 CLCN2P51788 898 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 CENPCQ03188 943 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 TAF12Q16514 161 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 IRGCQ6NXR0 463 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 ACRBPQ8NEB7 543 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 ATXN2LQ8WWM7 1075 aaKnown RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 TADA1Q96BN2 335 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 WDR24Q96S15 920 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PSMB7Q99436 277 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 FUT8Q9BYC5 575 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 SAR1AQ9NR31 198 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PRKAA2P54646 552 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 GUCY1A3Q02108 690 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 RIPK1Q13546 671 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PTGISQ16647 500 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 DCAF15Q66K64 600 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PSTPIP1O43586 416 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 ACTN3Q08043 901 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 E4F1Q66K89 784 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 INPP5DQ92835 1189 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 STN1Q9H668 368 aaKnown RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 RXFP1Q9HBX9 757 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 BFARQ9NZS9 450 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PALD1Q9ULE6 856 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 PDXKO00764 312 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 YARSP54577 528 aaKnown RBP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 RABGAP1LQ5R372 815 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 SH3GL2Q99962 352 aa6.96□□□□□ -1.29
VPS13B-202ENST00000357162 NIP7Q9Y221 180 aaKnown RBP eCLIP6.96□□□□□ -1.29
VPS13B-202ENST00000357162 SEC31AO94979 1220 aaKnown RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 COPB2P35606 906 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 IFNAR2P48551 515 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 LIG4P49917 911 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 ARFIP2P53365 341 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 TSPY1Q01534 308 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 STX3Q13277 289 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 FAM47CQ5HY64 1035 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CYB5D1Q6P9G0 228 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 KCTD6Q8NC69 237 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 TMEM35BQ8NCS4 154 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SH3GL1Q99961 368 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NDEL1Q9GZM8 345 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PICK1Q9NRD5 415 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CCDC87Q9NVE4 849 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 STMN3Q9NZ72 180 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CORO1CQ9ULV4 474 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 MRPL46Q9H2W6 279 aaKnown RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 EAF2Q96CJ1 260 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PRRG3Q9BZD7 231 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 BTBD18B2RXH4 712 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 TMED2Q15363 201 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 MAPK6Q16659 721 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF354CQ86Y25 554 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NUDCD3Q8IVD9 361 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CALML6Q8TD86 181 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SOX13Q9UN79 622 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PHF2O75151 1096 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NR3C1P04150 777 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 GZMAP12544 262 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms