RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF711Q9Y462 761 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ENAHQ8N8S7 591 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-201ENST00000356083 SNX31Q8N9S9 440 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 EMILIN3Q9NT22 766 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 GPS1Q13098 491 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ERAP2Q6P179 960 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 SPATA2LQ8IUW3 424 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-201ENST00000356083 TSSK1BQ9BXA7 367 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 NHEJ1Q9H9Q4 299 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-201ENST00000356083 MYH11P35749 1972 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 APOA1P02647 267 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 MB21D1Q8N884 522 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 SPATA33Q96N06 139 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 SEMA3EO15041 775 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ADRA2BP18089 450 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 PLCG1P19174 1290 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 PDAP1Q13442 181 aaKnown RBP18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ARHGEF7Q14155 803 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 P2RX5Q93086 422 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 E2F8A0AVK6 867 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ZFXP17010 805 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-201ENST00000356083 ABCD1P33897 745 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 RALGDSQ12967 914 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 TOGARAM2Q6ZUX3 1019 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 HAUS4Q9H6D7 363 aa18.28■□□□□ 0.52
COL27A1-201ENST00000356083 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 M0QYV0 167 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 DDX5P17844 614 aaKnown RBP18.27■□□□□ 0.52
COL27A1-201ENST00000356083 V9GYQ6 96 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 H0Y626 953 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 TRIM16O95361 564 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 ALDH18A1P54886 795 aaKnown RBP18.27■□□□□ 0.52
COL27A1-201ENST00000356083 PTH1RQ03431 593 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 SLFN12LQ6IEE8 588 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 PNKPQ96T60 521 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 SCUBE2Q9NQ36 999 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 ASNSD1Q9NWL6 643 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
COL27A1-201ENST00000356083 HDAC4P56524 1084 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 NAALADL2Q58DX5 795 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 RASSF9O75901 435 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 CTSHP09668 335 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-201ENST00000356083 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
COL27A1-201ENST00000356083 SOWAHDA6NJG2 315 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 GH2P01242 217 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 SERPING1P05155 500 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 SLC44A2Q8IWA5 706 aaPredicted RBP18.27■□□□□ 0.51
COL27A1-201ENST00000356083 PCDHB8Q9UN66 801 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 PCDHGA4Q9Y5G9 962 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 KRT37O76014 449 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 SH3BP1Q9Y3L3 701 aa18.27■□□□□ 0.51
COL27A1-201ENST00000356083 FKBP9O95302 570 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 MAN2A1Q16706 1144 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 HIBCHQ6NVY1 386 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 FKBP9P1Q75LS8 142 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 CLEC4FQ8N1N0 589 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 ABCB11O95342 1321 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 SKAP2O75563 359 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 ARHGAP17Q68EM7 881 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 RNF25Q96BH1 459 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 MCM8Q9UJA3 840 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 CYTH1Q15438 398 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 CDC37Q16543 378 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 FAM83BQ5T0W9 1011 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 BBS2Q9BXC9 721 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 PARVBQ9HBI1 364 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 ZBTB7BO15156 539 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 MLNP12872 115 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 SCRN1Q12765 414 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 MAPRE1Q15691 268 aaKnown RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 PLD3Q8IV08 490 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 PPP1R13BQ96KQ4 1090 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 IPO5O00410 1097 aaKnown RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 EIF4A3P38919 411 aaKnown RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 PBKQ96KB5 322 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 CUL7Q14999 1698 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 MAP3K13O43283 966 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 SHROOM1Q2M3G4 852 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 NEUROD4Q9HD90 331 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 ZNF512Q96ME7 567 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-201ENST00000356083 N6AMT1Q9Y5N5 214 aa18.26■□□□□ 0.51
COL27A1-201ENST00000356083 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 CYGBQ8WWM9 190 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ADCK1Q86TW2 530 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 CCDC151A5D8V7 595 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 NLRP11P59045 1033 aaKnown RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 DDX50Q9BQ39 737 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms