RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 MMEP08473 750 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 COMTP21964 271 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 MAPK4P31152 587 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
SIRPA-201ENST00000356025 ADCY8P40145 1251 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 ANKRD35Q8N283 1001 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 ATG4AQ8WYN0 398 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 RAB17Q9H0T7 212 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
SIRPA-201ENST00000356025 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 TBX3O15119 743 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 CLDN3O15551 220 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 CORO7P57737 925 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 DYNLT1P63172 113 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 Q4G0T1 1027 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 FLAD1Q8NFF5 587 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 WHAMMQ8TF30 809 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
SIRPA-201ENST00000356025 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 TTC7AQ9ULT0 858 aaPredicted RBP13.1□□□□□ -0.31
SIRPA-201ENST00000356025 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
SIRPA-201ENST00000356025 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 IGBP1P78318 339 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 PNMA2Q9UL42 364 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 ENTPD3O75355 529 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 STRN3Q13033 797 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 MICALCLQ6ZW33 695 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 PCDHA2Q9Y5H9 948 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 FRMD3A2A2Y4 597 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 GJB6O95452 261 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 UAP1Q16222 522 aaPredicted RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
SIRPA-201ENST00000356025 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 HSD17B14Q9BPX1 270 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 NEUROG2Q9H2A3 272 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 PCDHB4Q9Y5E5 795 aa13.09□□□□□ -0.31
SIRPA-201ENST00000356025 MYO3BQ8WXR4 1341 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 PJA2O43164 708 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 GPC5P78333 572 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 GLE1Q53GS7 698 aaKnown RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 ZNF365Q70YC5 407 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 MKL1Q969V6 931 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 EXOC7Q9UPT5 735 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 GOLGA8SH3BPF8 625 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 OPLAHO14841 1288 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 LSP1P33241 339 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 CAP2P40123 477 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 MFAP3P55082 362 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 ASTE1Q2TB18 679 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 CIAPIN1Q6FI81 312 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 CCDC137Q6PK04 289 aaKnown RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 GIMAP7Q8NHV1 300 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 TATDN2Q93075 761 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.32
SIRPA-201ENST00000356025 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 PSMD10O75832 226 aa13.08□□□□□ -0.32
SIRPA-201ENST00000356025 TKFCQ3LXA3 575 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms