RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 KIF11P52732 1056 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 EFNA5P52803 228 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 SP4Q02446 784 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 MXD4Q14582 209 aaPredicted RBP18.75■□□□□ 0.59
VPS13B-201ENST00000355155 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 SLFN12LQ6IEE8 588 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 ZPBP2Q6X784 338 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 SAPCD2Q86UD0 394 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 DNAI1Q9UI46 699 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 KIF5CO60282 957 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 ADRB2P07550 413 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
VPS13B-201ENST00000355155 HUNKP57058 714 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 MYL7Q01449 175 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 RGMBQ6NW40 437 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 C17orf99Q6UX52 265 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 PDGFCQ9NRA1 345 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
VPS13B-201ENST00000355155 C15orf39Q6ZRI6 1047 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 GPD1LQ8N335 351 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 PARD3BQ8TEW8 1205 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 WDR24Q96S15 920 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 SYT11Q9BT88 431 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 GPR88Q9GZN0 384 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 INTS2Q9H0H0 1204 aaKnown RBP18.74■□□□□ 0.59
VPS13B-201ENST00000355155 ABHD16BQ9H3Z7 469 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 FHOD1Q9Y613 1164 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 TLL2Q9Y6L7 1015 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 TISP43B9A030 160 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 NOP56O00567 594 aaKnown RBP18.74■□□□□ 0.59
VPS13B-201ENST00000355155 ASAP2O43150 1006 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 EXTL3O43909 919 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 SOX10P56693 466 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 CYP24A1Q07973 514 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 CAPSQ13938 189 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 ASIC2Q16515 512 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
VPS13B-201ENST00000355155 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 ERAP1Q9NZ08 941 aa18.74■□□□□ 0.59
VPS13B-201ENST00000355155 FAM155AB1AL88 458 aaPredicted RBP18.73■□□□□ 0.59
VPS13B-201ENST00000355155 IGF2BP3O00425 579 aaKnown RBP eCLIP18.73■□□□□ 0.59
VPS13B-201ENST00000355155 CASQ1P31415 396 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 GRM1Q13255 1194 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 OLFML2BQ68BL8 750 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 EEPD1Q7L9B9 569 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 USP37Q86T82 979 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 OLIG1Q8TAK6 271 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PSPC1Q8WXF1 523 aaKnown RBP18.73■□□□□ 0.59
VPS13B-201ENST00000355155 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 CRACR2AQ9BSW2 395 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 KIFC3Q9BVG8 833 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 C2orf40Q9H1Z8 148 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 APEX2Q9UBZ4 518 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 A0A0U1RQJ8 604 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 ACTN1P12814 892 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 FERP16591 822 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 GNG11P61952 73 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PPP3CAQ08209 521 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 ATRIPQ8WXE1 791 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 TMEM8AQ9HCN3 771 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PCDHA13Q9Y5I0 950 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 KRT86O43790 486 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 LDHAP00338 332 aaKnown RBP18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PLEKP08567 350 aaPredicted RBP18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PSMD6Q15008 389 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 SLC18A3Q16572 532 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 ARHGAP29Q52LW3 1261 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 TMEM143Q96AN5 459 aa18.73■□□□□ 0.59
VPS13B-201ENST00000355155 PPFIA4O75335 1185 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 GPC3P51654 580 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 POU5F1Q01860 360 aaKnown RBP18.72■□□□□ 0.59
VPS13B-201ENST00000355155 MAP2K5Q13163 448 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 NPLOC4Q8TAT6 608 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 DEPTORQ8TB45 409 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 COPS5Q92905 334 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 NLRC4Q9NPP4 1024 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 AJAP1Q9UKB5 411 aaPredicted RBP18.72■□□□□ 0.59
VPS13B-201ENST00000355155 SORBS3O60504 671 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS13B-201ENST00000355155 IPO7O95373 1038 aaKnown RBP18.72■□□□□ 0.59
VPS13B-201ENST00000355155 CETN1Q12798 172 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 STRN3Q13033 797 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 SPA17Q15506 151 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 FAM187BQ17R55 369 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 IFNL1Q8IU54 200 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 JAKMIP2Q96AA8 810 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 ERO1AQ96HE7 468 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 PCIF1Q9H4Z3 704 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 MRFAP1Q9Y605 127 aa18.72■□□□□ 0.59
VPS13B-201ENST00000355155 A0A0B4J269 797 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 MAGEB2O15479 319 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 LGALS2P05162 132 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 TRIM49P0CI25 452 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 TRIM49CP0CI26 452 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 STAT1P42224 750 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 DLG4P78352 724 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 WDR78Q5VTH9 848 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms