RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 HIST1H2AHQ96KK5 128 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 KIF2CQ99661 725 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 HIST1H2AJQ99878 128 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 H2AFJQ9BTM1 129 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 PUS3Q9BZE2 481 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 DNAJC25Q9H1X3 360 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 MRPL17Q9NRX2 175 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 GOLGA8QA0A0J9YX86 632 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 CCDC151A5D8V7 595 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 GOLGA8OA6NCC3 632 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 GOLGA8NF8WBI6 632 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 KIF3CO14782 793 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 HGSO14964 777 aaPredicted RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 MAFGO15525 162 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 RASSF9O75901 435 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 MARSP56192 900 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 ACTN3Q08043 901 aaPredicted RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 SYCP2LQ5T4T6 812 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 PLEKHM2Q8IWE5 1019 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 TBCKQ8TEA7 893 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 HASPINQ8TF76 798 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 SYMPKQ92797 1274 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 FAM227BQ96M60 508 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 FAM213AQ9BRX8 229 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 TMEM39BQ9GZU3 492 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 VCX3BQ9H321 246 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 KDM4CQ9H3R0 1056 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 ABCC4O15439 1325 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 SPATA31A1Q5TZJ5 1347 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 BASP1P80723 227 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 SLMAPQ14BN4 828 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 ERBB4Q15303 1308 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 TCEA2Q15560 299 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 DNAJC21Q5F1R6 531 aaKnown RBP5.47□□□□□ -1.53
CKAP5-202ENST00000354558 PPP1R2P3Q6NXS1 205 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 FAM186BQ8IYM0 893 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 SCYL3Q8IZE3 742 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 TSPYL6Q8N831 410 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 ARHGAP45Q92619 1136 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 MXD3Q9BW11 206 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 KRT82Q9NSB4 513 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 FBXL5Q9UKA1 691 aa5.47□□□□□ -1.53
CKAP5-202ENST00000354558 TBC1D3BA6NDS4 549 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 H3BRJ5 948 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 TEX33O43247 280 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 ZBED1O96006 694 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 ASS1P00966 412 aaKnown RBP5.46□□□□□ -1.53
CKAP5-202ENST00000354558 SLC11A2P49281 568 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 RAP1GDS1P52306 607 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 THOP1P52888 689 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 TRIM59Q8IWR1 403 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 PDCD7Q8N8D1 485 aaKnown RBP5.46□□□□□ -1.53
CKAP5-202ENST00000354558 SLC7A14Q8TBB6 771 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 ARHGEF2Q92974 986 aaKnown RBP5.46□□□□□ -1.53
CKAP5-202ENST00000354558 MCUR1Q96AQ8 359 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 PHACTR3Q96KR7 559 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 OSBPL5Q9H0X9 879 aaPredicted RBP5.46□□□□□ -1.53
CKAP5-202ENST00000354558 BRD9Q9H8M2 597 aa5.46□□□□□ -1.53
CKAP5-202ENST00000354558 TTC37Q6PGP7 1564 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 E7EWF7 191 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 TTI1O43156 1089 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 BUB1O43683 1085 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 SUN1O94901 812 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 CD4P01730 458 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 GNSP15586 552 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 GCFC2P16383 781 aaKnown RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 SYN1P17600 705 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 CLNS1AP54105 237 aaKnown RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 CREMQ03060 361 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ZNF177Q13360 481 aaPredicted RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 RPS6KA1Q15418 735 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 DBN1Q16643 649 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 NOTUMQ6P988 496 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 FAM124AQ86V42 546 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 COL23A1Q86Y22 540 aaPredicted RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 KSR1Q8IVT5 923 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 MGARPQ8TDB4 240 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 RASGRP4Q8TDF6 673 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ZBTB9Q96C00 473 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 CCDC124Q96CT7 223 aaKnown RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 CRAMP1Q96RY5 1269 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 STK17AQ9UEE5 414 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 BCAP29Q9UHQ4 241 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 AXIN2Q9Y2T1 843 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 NR2E1Q9Y466 385 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 HEG1Q9ULI3 1381 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 PIK3R2O00459 728 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ZSCAN9O15535 394 aaPredicted RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 LRRN2O75325 713 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 INHBAP08476 426 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 HSPA6P17066 643 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ETFBP38117 255 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 BCAR1P56945 870 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 POLR2FP61218 127 aaKnown RBP5.46□□□□□ -1.54
CKAP5-202ENST00000354558 PRAMEP78395 509 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 TP53BP2Q13625 1128 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 ALCAMQ13740 583 aa5.46□□□□□ -1.54
CKAP5-202ENST00000354558 NCAPHQ15003 741 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms